Cluster: HRGMv2_0825_CGC23
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0825
- CGC Family ID: CGCFAM_00621
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0825_5 | HRGMv2_0825_5_10 | 6476 | 7195 | + | 3.A.1.211.5 |
| pfam | HRGMv2_0825_5 | HRGMv2_0825_5_11 | 7196 | 7957 | + | ABC2_membrane | ABC2_membrane_3 |
| CAZyme | HRGMv2_0825_5 | HRGMv2_0825_5_12 | 7975 | 9165 | - | GH3 |
Gene ID: HRGMv2_0825_5_10
Type: TC
Location: 6476 - 7195 (+)
Type: TC
Location: 6476 - 7195 (+)
Gene ID: HRGMv2_0825_5_11
Type: pfam
Location: 7196 - 7957 (+)
Type: pfam
Location: 7196 - 7957 (+)
Gene ID: HRGMv2_0825_5_12
Type: CAZyme
Location: 7975 - 9165 (-)
Type: CAZyme
Location: 7975 - 9165 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.