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Cluster: HRGMv2_0825_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_8 5112 5837 - GH73
NULL(UNKNOWN) HRGMv2_0825_11 HRGMv2_0825_11_9 6004 6762 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0825_11 HRGMv2_0825_11_10 6924 7541 + Diphthami_syn_2
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_11 7770 9251 + GH77
TC HRGMv2_0825_11 HRGMv2_0825_11_12 9661 10977 + 3.A.1.1.45
TC HRGMv2_0825_11 HRGMv2_0825_11_13 11051 11914 + 3.A.1.1.45
TC HRGMv2_0825_11 HRGMv2_0825_11_14 11914 12768 + 3.A.1.1.45
Gene ID: HRGMv2_0825_11_8
Type: CAZyme
Location: 5112 - 5837 (-)
Gene ID: HRGMv2_0825_11_9
Type:
Location: 6004 - 6762 (-)
Gene ID: HRGMv2_0825_11_10
Type: pfam
Location: 6924 - 7541 (+)
Gene ID: HRGMv2_0825_11_11
Type: CAZyme
Location: 7770 - 9251 (+)
Gene ID: HRGMv2_0825_11_12
Type: TC
Location: 9661 - 10977 (+)
Gene ID: HRGMv2_0825_11_13
Type: TC
Location: 11051 - 11914 (+)
Gene ID: HRGMv2_0825_11_14
Type: TC
Location: 11914 - 12768 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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