dbCAN Logo

Cluster: HRGMv2_0825_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_26 26364 27239 + GT2
TC HRGMv2_0825_2 HRGMv2_0825_2_27 27271 29205 + 9.B.18.2.1
TC HRGMv2_0825_2 HRGMv2_0825_2_28 29354 29923 + 9.B.18.1.2
pfam HRGMv2_0825_2 HRGMv2_0825_2_29 29927 30823 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_30 30863 31999 + GT4
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_31 31989 32885 + GT2
pfam HRGMv2_0825_2 HRGMv2_0825_2_32 32951 33799 - Glycos_transf_2
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_33 33888 34682 + GT2
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_34 34700 35701 + GT2
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_35 35706 36701 + GT2
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_36 36732 37931 + GT4
Gene ID: HRGMv2_0825_2_26
Type: CAZyme
Location: 26364 - 27239 (+)
Gene ID: HRGMv2_0825_2_27
Type: TC
Location: 27271 - 29205 (+)
Gene ID: HRGMv2_0825_2_28
Type: TC
Location: 29354 - 29923 (+)
Gene ID: HRGMv2_0825_2_29
Type: pfam
Location: 29927 - 30823 (+)
Gene ID: HRGMv2_0825_2_30
Type: CAZyme
Location: 30863 - 31999 (+)
Gene ID: HRGMv2_0825_2_31
Type: CAZyme
Location: 31989 - 32885 (+)
Gene ID: HRGMv2_0825_2_32
Type: pfam
Location: 32951 - 33799 (-)
Gene ID: HRGMv2_0825_2_33
Type: CAZyme
Location: 33888 - 34682 (+)
Gene ID: HRGMv2_0825_2_34
Type: CAZyme
Location: 34700 - 35701 (+)
Gene ID: HRGMv2_0825_2_35
Type: CAZyme
Location: 35706 - 36701 (+)
Gene ID: HRGMv2_0825_2_36
Type: CAZyme
Location: 36732 - 37931 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List