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Genome Details

Selected Rep_genome_ID: HRGMv2_0545
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
Lepagella
→
Species
Lepagella sp019416425
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR037408 2,849,983 95.69% 0.83% China Asia CGMR
HRGMv2_0545 3,424,575 97.79% 0.83% Japan Asia HRGM
Rep_313 3,034,158 94.9168% 1.46941% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0545_CGC42 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0545_CGC21 CGCFAM_00031 Yes 7 3 pectin/galactan
HRGMv2_0545_CGC15 CGCFAM_00062 Yes 7 4 beta-glucan
HRGMv2_0545_CGC26 CGCFAM_00082 Yes 15 5 beta-mannan
HRGMv2_0545_CGC4 CGCFAM_00104 Yes 4 1
HRGMv2_0545_CGC49 CGCFAM_00240 Yes 6 2 fructan
HRGMv2_0545_CGC32 CGCFAM_00356 Yes 7 1
HRGMv2_0545_CGC29 CGCFAM_00395 Yes 25 4
HRGMv2_0545_CGC10 CGCFAM_00721 Yes 4 1
HRGMv2_0545_CGC19 CGCFAM_00997 Yes 5 2
HRGMv2_0545_CGC38 CGCFAM_00998 Yes 7 2
HRGMv2_0545_CGC39 CGCFAM_01094 Yes 4 3
HRGMv2_0545_CGC17 CGCFAM_01223 Yes 11 5
HRGMv2_0545_CGC25 CGCFAM_01228 Yes 5 2
HRGMv2_0545_CGC48 CGCFAM_01302 Yes 4 1
HRGMv2_0545_CGC13 CGCFAM_01787 Yes 9 1
HRGMv2_0545_CGC5 CGCFAM_01827 Yes 3 2
HRGMv2_0545_CGC7 CGCFAM_02230 Yes 9 1
HRGMv2_0545_CGC1 CGCFAM_02541 Yes 6 2
HRGMv2_0545_CGC31 CGCFAM_03811 Yes 8 1
HRGMv2_0545_CGC6 CGCFAM_04245 Yes 3 1
HRGMv2_0545_CGC44 CGCFAM_04293 Yes 6 1
HRGMv2_0545_CGC16 CGCFAM_06017 Yes 7 5
HRGMv2_0545_CGC30 CGCFAM_06399 Yes 9 3
HRGMv2_0545_CGC20 CGCFAM_06897 Yes 6 1
Top CAZyme Families