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Cluster: HRGMv2_0545_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0545_73 HRGMv2_0545_73_18 24004 25719 - 2.A.81.1.1
TC HRGMv2_0545_73 HRGMv2_0545_73_19 26088 26960 + 3.A.1.132.6
NULL(UNKNOWN) HRGMv2_0545_73 HRGMv2_0545_73_20 26950 27750 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0545_73 HRGMv2_0545_73_21 27752 28108 + GntR
TC HRGMv2_0545_73 HRGMv2_0545_73_22 28163 29149 + 3.A.1.128.7
pfam HRGMv2_0545_73 HRGMv2_0545_73_23 29146 30471 + ABC2_membrane_3
NULL(UNKNOWN) HRGMv2_0545_73 HRGMv2_0545_73_24 30527 30709 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0545_73 HRGMv2_0545_73_25 30898 32484 - GT83
Gene ID: HRGMv2_0545_73_18
Type: TC
Location: 24004 - 25719 (-)
Gene ID: HRGMv2_0545_73_19
Type: TC
Location: 26088 - 26960 (+)
Gene ID: HRGMv2_0545_73_20
Type:
Location: 26950 - 27750 (+)
Gene ID: HRGMv2_0545_73_21
Type: TF
Location: 27752 - 28108 (+)
Gene ID: HRGMv2_0545_73_22
Type: TC
Location: 28163 - 29149 (+)
Gene ID: HRGMv2_0545_73_23
Type: pfam
Location: 29146 - 30471 (+)
Gene ID: HRGMv2_0545_73_24
Type:
Location: 30527 - 30709 (+)
Gene ID: HRGMv2_0545_73_25
Type: CAZyme
Location: 30898 - 32484 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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