dbCAN Logo

Cluster: HRGMv2_0545_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0545_34 HRGMv2_0545_34_52 70872 72185 - GH25
CAZyme HRGMv2_0545_34 HRGMv2_0545_34_53 72283 73239 + GT2
CAZyme HRGMv2_0545_34 HRGMv2_0545_34_54 73336 75579 - GH3
pfam HRGMv2_0545_34 HRGMv2_0545_34_55 75585 77609 - DUF5016 | DUF5125 | DUF5125 | DUF5121 | DUF5121
CAZyme HRGMv2_0545_34 HRGMv2_0545_34_56 77637 79133 - GH30_3
pfam HRGMv2_0545_34 HRGMv2_0545_34_57 79167 80699 - SusD_RagB | SusD-like_3
TC HRGMv2_0545_34 HRGMv2_0545_34_58 80714 83683 - 1.B.14.6.1
Gene ID: HRGMv2_0545_34_52
Type: CAZyme
Location: 70872 - 72185 (-)
Gene ID: HRGMv2_0545_34_53
Type: CAZyme
Location: 72283 - 73239 (+)
Gene ID: HRGMv2_0545_34_54
Type: CAZyme
Location: 73336 - 75579 (-)
Gene ID: HRGMv2_0545_34_55
Type: pfam
Location: 75585 - 77609 (-)
Gene ID: HRGMv2_0545_34_56
Type: CAZyme
Location: 77637 - 79133 (-)
Gene ID: HRGMv2_0545_34_57
Type: pfam
Location: 79167 - 80699 (-)
Gene ID: HRGMv2_0545_34_58
Type: TC
Location: 80714 - 83683 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List