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Cluster: HRGMv2_0545_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0545_30 HRGMv2_0545_30_21 28698 30491 - 2.A.58.2.2
pfam HRGMv2_0545_30 HRGMv2_0545_30_22 30597 31190 + DHFR_1
CAZyme HRGMv2_0545_30 HRGMv2_0545_30_23 31187 32452 + GT4
STP HRGMv2_0545_30 HRGMv2_0545_30_24 32533 34521 - HATPase_c
pfam HRGMv2_0545_30 HRGMv2_0545_30_25 34626 35891 - ketoacyl-synt | Ketoacyl-synt_C
TC HRGMv2_0545_30 HRGMv2_0545_30_26 35923 36159 - 3.D.1.6.4
sulfatase HRGMv2_0545_30 HRGMv2_0545_30_27 36319 37113 - S1_63
STP HRGMv2_0545_30 HRGMv2_0545_30_28 37150 37977 - Fer4
TC HRGMv2_0545_30 HRGMv2_0545_30_29 37996 40089 - 2.A.9.3.2
Gene ID: HRGMv2_0545_30_21
Type: TC
Location: 28698 - 30491 (-)
Gene ID: HRGMv2_0545_30_22
Type: pfam
Location: 30597 - 31190 (+)
Gene ID: HRGMv2_0545_30_23
Type: CAZyme
Location: 31187 - 32452 (+)
Gene ID: HRGMv2_0545_30_24
Type: STP
Location: 32533 - 34521 (-)
Gene ID: HRGMv2_0545_30_25
Type: pfam
Location: 34626 - 35891 (-)
Gene ID: HRGMv2_0545_30_26
Type: TC
Location: 35923 - 36159 (-)
Gene ID: HRGMv2_0545_30_27
Type: sulfatase
Location: 36319 - 37113 (-)
Gene ID: HRGMv2_0545_30_28
Type: STP
Location: 37150 - 37977 (-)
Gene ID: HRGMv2_0545_30_29
Type: TC
Location: 37996 - 40089 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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