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Cluster: HRGMv2_0545_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0545_70 HRGMv2_0545_70_21 21882 22526 + 2.A.115.2.14
TF HRGMv2_0545_70 HRGMv2_0545_70_22 23039 24433 + Rrf2
pfam HRGMv2_0545_70 HRGMv2_0545_70_23 24447 25019 - tRNA_edit
CAZyme HRGMv2_0545_70 HRGMv2_0545_70_24 25290 26825 + GH30_2
CAZyme HRGMv2_0545_70 HRGMv2_0545_70_25 26900 28363 - GH57
CAZyme HRGMv2_0545_70 HRGMv2_0545_70_26 28424 29686 - GT4
CAZyme HRGMv2_0545_70 HRGMv2_0545_70_27 29708 31660 - GH133
TC HRGMv2_0545_70 HRGMv2_0545_70_28 31952 33409 - 3.D.9.1.1
TC HRGMv2_0545_70 HRGMv2_0545_70_29 33442 34959 - 3.D.1.5.1
TC HRGMv2_0545_70 HRGMv2_0545_70_30 34984 36969 - 3.D.1.2.1
TC HRGMv2_0545_70 HRGMv2_0545_70_31 36972 37283 - 3.D.1.2.1
pfam HRGMv2_0545_70 HRGMv2_0545_70_32 37289 37816 - Oxidored_q3
STP HRGMv2_0545_70 HRGMv2_0545_70_33 37843 38406 - Fer4 | Fer4
TC HRGMv2_0545_70 HRGMv2_0545_70_34 38428 39306 - 3.A.2.1.1
TC HRGMv2_0545_70 HRGMv2_0545_70_35 39322 40905 - 3.A.2.1.3
pfam HRGMv2_0545_70 HRGMv2_0545_70_36 40908 41453 - OSCP
pfam HRGMv2_0545_70 HRGMv2_0545_70_37 41458 41955 - ATP-synt_B
TC HRGMv2_0545_70 HRGMv2_0545_70_38 42044 42313 - 3.A.2.1.6
TC HRGMv2_0545_70 HRGMv2_0545_70_39 42394 43758 - 3.A.2.1.6
pfam HRGMv2_0545_70 HRGMv2_0545_70_40 43781 44017 - ATP-synt_DE_N
TC HRGMv2_0545_70 HRGMv2_0545_70_41 44026 45528 - 3.A.2.1.2
TC HRGMv2_0545_70 HRGMv2_0545_70_42 45586 46665 - 3.D.1.5.1
TC HRGMv2_0545_70 HRGMv2_0545_70_43 46715 48346 - 3.D.1.5.1
TC HRGMv2_0545_70 HRGMv2_0545_70_44 48353 48967 - 3.D.1.6.1
TC HRGMv2_0545_70 HRGMv2_0545_70_45 48958 49329 - 3.D.1.8.1
Gene ID: HRGMv2_0545_70_21
Type: TC
Location: 21882 - 22526 (+)
Gene ID: HRGMv2_0545_70_22
Type: TF
Location: 23039 - 24433 (+)
Gene ID: HRGMv2_0545_70_23
Type: pfam
Location: 24447 - 25019 (-)
Gene ID: HRGMv2_0545_70_24
Type: CAZyme
Location: 25290 - 26825 (+)
Gene ID: HRGMv2_0545_70_25
Type: CAZyme
Location: 26900 - 28363 (-)
Gene ID: HRGMv2_0545_70_26
Type: CAZyme
Location: 28424 - 29686 (-)
Gene ID: HRGMv2_0545_70_27
Type: CAZyme
Location: 29708 - 31660 (-)
Gene ID: HRGMv2_0545_70_28
Type: TC
Location: 31952 - 33409 (-)
Gene ID: HRGMv2_0545_70_29
Type: TC
Location: 33442 - 34959 (-)
Gene ID: HRGMv2_0545_70_30
Type: TC
Location: 34984 - 36969 (-)
Gene ID: HRGMv2_0545_70_31
Type: TC
Location: 36972 - 37283 (-)
Gene ID: HRGMv2_0545_70_32
Type: pfam
Location: 37289 - 37816 (-)
Gene ID: HRGMv2_0545_70_33
Type: STP
Location: 37843 - 38406 (-)
Gene ID: HRGMv2_0545_70_34
Type: TC
Location: 38428 - 39306 (-)
Gene ID: HRGMv2_0545_70_35
Type: TC
Location: 39322 - 40905 (-)
Gene ID: HRGMv2_0545_70_36
Type: pfam
Location: 40908 - 41453 (-)
Gene ID: HRGMv2_0545_70_37
Type: pfam
Location: 41458 - 41955 (-)
Gene ID: HRGMv2_0545_70_38
Type: TC
Location: 42044 - 42313 (-)
Gene ID: HRGMv2_0545_70_39
Type: TC
Location: 42394 - 43758 (-)
Gene ID: HRGMv2_0545_70_40
Type: pfam
Location: 43781 - 44017 (-)
Gene ID: HRGMv2_0545_70_41
Type: TC
Location: 44026 - 45528 (-)
Gene ID: HRGMv2_0545_70_42
Type: TC
Location: 45586 - 46665 (-)
Gene ID: HRGMv2_0545_70_43
Type: TC
Location: 46715 - 48346 (-)
Gene ID: HRGMv2_0545_70_44
Type: TC
Location: 48353 - 48967 (-)
Gene ID: HRGMv2_0545_70_45
Type: TC
Location: 48958 - 49329 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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