Cluster: HRGMv2_0545_CGC26
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate: beta-mannan
- Genome ID: HRGMv2_0545
- CGC Family ID: CGCFAM_00082
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0545_67 | HRGMv2_0545_67_12 | 9175 | 11544 | - | GH3 |
| CAZyme | HRGMv2_0545_67 | HRGMv2_0545_67_13 | 11556 | 13826 | - | GH3 |
| NULL(UNKNOWN) | HRGMv2_0545_67 | HRGMv2_0545_67_14 | 13969 | 14937 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0545_67 | HRGMv2_0545_67_15 | 15043 | 16782 | - | 8.A.46.2.2 |
| NULL(UNKNOWN) | HRGMv2_0545_67 | HRGMv2_0545_67_16 | 16799 | 17200 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0545_67 | HRGMv2_0545_67_17 | 17225 | 19978 | - | 1.B.14.6.2 |
| CAZyme | HRGMv2_0545_67 | HRGMv2_0545_67_18 | 20008 | 21204 | - | GH5_4 |
| TF | HRGMv2_0545_67 | HRGMv2_0545_67_19 | 21409 | 21741 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_0545_67 | HRGMv2_0545_67_20 | 21787 | 23130 | - | 2.A.2.3.6 |
| CAZyme | HRGMv2_0545_67 | HRGMv2_0545_67_21 | 23198 | 25690 | - | GH94 |
| CAZyme | HRGMv2_0545_67 | HRGMv2_0545_67_22 | 25715 | 26848 | - | GH5_38 |
| TF | HRGMv2_0545_67 | HRGMv2_0545_67_23 | 27231 | 30119 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_0545_67 | HRGMv2_0545_67_24 | 30573 | 31250 | + | 2.A.115.2.8 |
| NULL(UNKNOWN) | HRGMv2_0545_67 | HRGMv2_0545_67_25 | 31592 | 31759 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0545_67 | HRGMv2_0545_67_26 | 32040 | 33380 | - | 2.A.119.1.2 |
Gene ID: HRGMv2_0545_67_12
Type: CAZyme
Location: 9175 - 11544 (-)
Type: CAZyme
Location: 9175 - 11544 (-)
Gene ID: HRGMv2_0545_67_13
Type: CAZyme
Location: 11556 - 13826 (-)
Type: CAZyme
Location: 11556 - 13826 (-)
Gene ID: HRGMv2_0545_67_14
Type:
Location: 13969 - 14937 (-)
Type:
Location: 13969 - 14937 (-)
Gene ID: HRGMv2_0545_67_15
Type: TC
Location: 15043 - 16782 (-)
Type: TC
Location: 15043 - 16782 (-)
Gene ID: HRGMv2_0545_67_16
Type:
Location: 16799 - 17200 (-)
Type:
Location: 16799 - 17200 (-)
Gene ID: HRGMv2_0545_67_17
Type: TC
Location: 17225 - 19978 (-)
Type: TC
Location: 17225 - 19978 (-)
Gene ID: HRGMv2_0545_67_18
Type: CAZyme
Location: 20008 - 21204 (-)
Type: CAZyme
Location: 20008 - 21204 (-)
Gene ID: HRGMv2_0545_67_19
Type: TF
Location: 21409 - 21741 (-)
Type: TF
Location: 21409 - 21741 (-)
Gene ID: HRGMv2_0545_67_20
Type: TC
Location: 21787 - 23130 (-)
Type: TC
Location: 21787 - 23130 (-)
Gene ID: HRGMv2_0545_67_21
Type: CAZyme
Location: 23198 - 25690 (-)
Type: CAZyme
Location: 23198 - 25690 (-)
Gene ID: HRGMv2_0545_67_22
Type: CAZyme
Location: 25715 - 26848 (-)
Type: CAZyme
Location: 25715 - 26848 (-)
Gene ID: HRGMv2_0545_67_23
Type: TF
Location: 27231 - 30119 (-)
Type: TF
Location: 27231 - 30119 (-)
Gene ID: HRGMv2_0545_67_24
Type: TC
Location: 30573 - 31250 (+)
Type: TC
Location: 30573 - 31250 (+)
Gene ID: HRGMv2_0545_67_25
Type:
Location: 31592 - 31759 (-)
Type:
Location: 31592 - 31759 (-)
Gene ID: HRGMv2_0545_67_26
Type: TC
Location: 32040 - 33380 (-)
Type: TC
Location: 32040 - 33380 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp019416425
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.