Genome Details
Selected Rep_genome_ID: HRGMv2_0402
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000436695
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0402 | 3,388,122 | 97.74% | 0.37% | UK | Europe | HRGM |
| MGYG000004698 | 3,424,026 | 94.44% | 0.46% | Denmark | Europe | UHGG |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0402_CGC4 | CGCFAM_00017 | Yes | 12 | 4 | fructan |
| HRGMv2_0402_CGC31 | CGCFAM_00028 | Yes | 5 | 3 | |
| HRGMv2_0402_CGC24 | CGCFAM_00044 | Yes | 12 | 6 | beta-mannan/xylan/beta-glucan |
| HRGMv2_0402_CGC12 | CGCFAM_00048 | Yes | 10 | 3 | |
| HRGMv2_0402_CGC9 | CGCFAM_00082 | Yes | 12 | 5 | beta-mannan |
| HRGMv2_0402_CGC6 | CGCFAM_00136 | Yes | 11 | 5 | pectin |
| HRGMv2_0402_CGC10 | CGCFAM_00217 | Yes | 20 | 13 | |
| HRGMv2_0402_CGC8 | CGCFAM_02620 | Yes | 5 | 2 | |
| HRGMv2_0402_CGC30 | CGCFAM_02729 | Yes | 14 | 7 | |
| HRGMv2_0402_CGC27 | CGCFAM_03865 | Yes | 17 | 10 | |
| HRGMv2_0402_CGC33 | CGCFAM_03977 | Yes | 5 | 1 | |
| HRGMv2_0402_CGC23 | CGCFAM_03978 | Yes | 6 | 1 | |
| HRGMv2_0402_CGC22 | CGCFAM_05882 | Yes | 5 | 1 | |
| HRGMv2_0402_CGC13 | CGCFAM_05951 | Yes | 5 | 1 | |
| HRGMv2_0402_CGC2 | CGCFAM_09652 | Yes | 7 | 2 |
Top CAZyme Families