Cluster: HRGMv2_0402_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0402
- CGC Family ID: CGCFAM_05882
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0402_26 | HRGMv2_0402_26_23 | 18367 | 22158 | + | GT2 |
| pfam | HRGMv2_0402_26 | HRGMv2_0402_26_24 | 22179 | 23486 | + | BT1 |
| TC | HRGMv2_0402_26 | HRGMv2_0402_26_25 | 23572 | 24510 | + | 2.A.4.7.9 |
| pfam | HRGMv2_0402_26 | HRGMv2_0402_26_26 | 24699 | 26459 | + | Transketolase_N | E1_dh | Transket_pyr | Transketolase_C | DXP_synthase_N |
| TC | HRGMv2_0402_26 | HRGMv2_0402_26_27 | 26588 | 27367 | - | 2.A.5.5.2 |
Gene ID: HRGMv2_0402_26_23
Type: CAZyme
Location: 18367 - 22158 (+)
Type: CAZyme
Location: 18367 - 22158 (+)
Gene ID: HRGMv2_0402_26_24
Type: pfam
Location: 22179 - 23486 (+)
Type: pfam
Location: 22179 - 23486 (+)
Gene ID: HRGMv2_0402_26_25
Type: TC
Location: 23572 - 24510 (+)
Type: TC
Location: 23572 - 24510 (+)
Gene ID: HRGMv2_0402_26_26
Type: pfam
Location: 24699 - 26459 (+)
Type: pfam
Location: 24699 - 26459 (+)
Gene ID: HRGMv2_0402_26_27
Type: TC
Location: 26588 - 27367 (-)
Type: TC
Location: 26588 - 27367 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp000436695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.