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Cluster: HRGMv2_0402_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0402_8 HRGMv2_0402_8_1 645 1760 + GH5_38
CAZyme HRGMv2_0402_8 HRGMv2_0402_8_2 1789 4281 + GH94
TC HRGMv2_0402_8 HRGMv2_0402_8_3 4317 5702 + 2.A.2.3.6
CAZyme HRGMv2_0402_8 HRGMv2_0402_8_4 5869 7065 + GH5_4
TC HRGMv2_0402_8 HRGMv2_0402_8_5 7358 10537 + 1.B.14.6.2
TC HRGMv2_0402_8 HRGMv2_0402_8_6 10583 12304 + 8.A.46.2.2
NULL(UNKNOWN) HRGMv2_0402_8 HRGMv2_0402_8_7 12316 13308 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0402_8 HRGMv2_0402_8_8 13372 15705 + GH3
CAZyme HRGMv2_0402_8 HRGMv2_0402_8_9 15717 18086 + GH3
peptidase HRGMv2_0402_8 HRGMv2_0402_8_10 18584 22285 + C56.972
TC HRGMv2_0402_8 HRGMv2_0402_8_11 22438 22983 + 2.A.51.1.6
TC HRGMv2_0402_8 HRGMv2_0402_8_12 23027 23602 + 2.A.51.1.6
Gene ID: HRGMv2_0402_8_1
Type: CAZyme
Location: 645 - 1760 (+)
Gene ID: HRGMv2_0402_8_2
Type: CAZyme
Location: 1789 - 4281 (+)
Gene ID: HRGMv2_0402_8_3
Type: TC
Location: 4317 - 5702 (+)
Gene ID: HRGMv2_0402_8_4
Type: CAZyme
Location: 5869 - 7065 (+)
Gene ID: HRGMv2_0402_8_5
Type: TC
Location: 7358 - 10537 (+)
Gene ID: HRGMv2_0402_8_6
Type: TC
Location: 10583 - 12304 (+)
Gene ID: HRGMv2_0402_8_7
Type:
Location: 12316 - 13308 (+)
Gene ID: HRGMv2_0402_8_8
Type: CAZyme
Location: 13372 - 15705 (+)
Gene ID: HRGMv2_0402_8_9
Type: CAZyme
Location: 15717 - 18086 (+)
Gene ID: HRGMv2_0402_8_10
Type: peptidase
Location: 18584 - 22285 (+)
Gene ID: HRGMv2_0402_8_11
Type: TC
Location: 22438 - 22983 (+)
Gene ID: HRGMv2_0402_8_12
Type: TC
Location: 23027 - 23602 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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