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Genome Details

Selected Rep_genome_ID: HRGMv2_0333
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900551055
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0333 3,368,624 98.51% 0.462% US North America HRGM
Rep_186 2,830,121 95.4839% 0.0119474% NA NA WIS
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0333_CGC17 CGCFAM_00001 Yes 4 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0333_CGC39 CGCFAM_00001 Yes 8 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0333_CGC3 CGCFAM_00003 Yes 12 3
HRGMv2_0333_CGC15 CGCFAM_00013 Yes 4 1
HRGMv2_0333_CGC12 CGCFAM_00033 Yes 4 2
HRGMv2_0333_CGC31 CGCFAM_00059 Yes 4 1
HRGMv2_0333_CGC26 CGCFAM_00080 Yes 7 1
HRGMv2_0333_CGC6 CGCFAM_00146 Yes 9 6
HRGMv2_0333_CGC23 CGCFAM_00147 Yes 4 2
HRGMv2_0333_CGC14 CGCFAM_00184 Yes 8 3
HRGMv2_0333_CGC35 CGCFAM_00437 Yes 8 1
HRGMv2_0333_CGC21 CGCFAM_00793 Yes 3 1
HRGMv2_0333_CGC29 CGCFAM_01002 Yes 6 1
HRGMv2_0333_CGC25 CGCFAM_01255 Yes 3 1
HRGMv2_0333_CGC16 CGCFAM_01638 Yes 4 2
HRGMv2_0333_CGC20 CGCFAM_01664 Yes 4 1
HRGMv2_0333_CGC19 CGCFAM_02165 Yes 5 3
HRGMv2_0333_CGC2 CGCFAM_02251 Yes 12 3
HRGMv2_0333_CGC7 CGCFAM_02868 Yes 6 1
HRGMv2_0333_CGC11 CGCFAM_03892 Yes 3 1
HRGMv2_0333_CGC24 CGCFAM_05944 Yes 11 8
HRGMv2_0333_CGC1 CGCFAM_08610 Yes 9 4
HRGMv2_0333_CGC28 CGCFAM_09591 Yes 4 1
HRGMv2_0333_CGC10 CGCFAM_09614 Yes 13 7
HRGMv2_0333_CGC13 CGCFAM_09615 Yes 5 2
Top CAZyme Families