Cluster: HRGMv2_0333_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0333
- CGC Family ID: CGCFAM_00001
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0333_7 | HRGMv2_0333_7_6 | 8249 | 11458 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0333_7 | HRGMv2_0333_7_7 | 11614 | 13431 | + | SusD_RagB | SusD-like_3 |
| pfam | HRGMv2_0333_7 | HRGMv2_0333_7_8 | 13540 | 15144 | + | DUF4957 | DUF5123 |
| CAZyme | HRGMv2_0333_7 | HRGMv2_0333_7_9 | 15715 | 18288 | - | GH3 |
Gene ID: HRGMv2_0333_7_6
Type: TC
Location: 8249 - 11458 (+)
Type: TC
Location: 8249 - 11458 (+)
Gene ID: HRGMv2_0333_7_7
Type: pfam
Location: 11614 - 13431 (+)
Type: pfam
Location: 11614 - 13431 (+)
Gene ID: HRGMv2_0333_7_8
Type: pfam
Location: 13540 - 15144 (+)
Type: pfam
Location: 13540 - 15144 (+)
Gene ID: HRGMv2_0333_7_9
Type: CAZyme
Location: 15715 - 18288 (-)
Type: CAZyme
Location: 15715 - 18288 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900551055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.