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Cluster: HRGMv2_0333_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0333_6 HRGMv2_0333_6_19 22550 24742 - GH36
STP HRGMv2_0333_6 HRGMv2_0333_6_20 25017 25910 - PfkB
TC HRGMv2_0333_6 HRGMv2_0333_6_21 26023 27282 - 2.A.1.7.17
CAZyme HRGMv2_0333_6 HRGMv2_0333_6_22 27336 29162 - GH32
CAZyme HRGMv2_0333_6 HRGMv2_0333_6_23 29458 31899 - GH32
pfam HRGMv2_0333_6 HRGMv2_0333_6_24 32098 33285 - DUF4960
TC HRGMv2_0333_6 HRGMv2_0333_6_25 33313 35025 - 8.A.46.1.5
TC HRGMv2_0333_6 HRGMv2_0333_6_26 35051 38095 - 1.B.14.6.1
Gene ID: HRGMv2_0333_6_19
Type: CAZyme
Location: 22550 - 24742 (-)
Gene ID: HRGMv2_0333_6_20
Type: STP
Location: 25017 - 25910 (-)
Gene ID: HRGMv2_0333_6_21
Type: TC
Location: 26023 - 27282 (-)
Gene ID: HRGMv2_0333_6_22
Type: CAZyme
Location: 27336 - 29162 (-)
Gene ID: HRGMv2_0333_6_23
Type: CAZyme
Location: 29458 - 31899 (-)
Gene ID: HRGMv2_0333_6_24
Type: pfam
Location: 32098 - 33285 (-)
Gene ID: HRGMv2_0333_6_25
Type: TC
Location: 33313 - 35025 (-)
Gene ID: HRGMv2_0333_6_26
Type: TC
Location: 35051 - 38095 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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