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Cluster: HRGMv2_0333_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0333_1 HRGMv2_0333_1_86 95176 96525 + CBM50
pfam HRGMv2_0333_1 HRGMv2_0333_1_87 96543 97295 + OMP_b-brl_2
TC HRGMv2_0333_1 HRGMv2_0333_1_88 97373 99052 + 2.A.17.4.5
TF HRGMv2_0333_1 HRGMv2_0333_1_89 99307 99894 - GerE
TC HRGMv2_0333_1 HRGMv2_0333_1_90 100004 101161 - 3.B.1.1.2
pfam HRGMv2_0333_1 HRGMv2_0333_1_91 101277 101720 - Biotin_lipoyl | Biotin_lipoyl_2
pfam HRGMv2_0333_1 HRGMv2_0333_1_92 101778 102743 - OAD_gamma
TC HRGMv2_0333_1 HRGMv2_0333_1_93 102883 104571 - 2.A.81.1.2
pfam HRGMv2_0333_1 HRGMv2_0333_1_94 105124 106986 + MM_CoA_mutase
STP HRGMv2_0333_1 HRGMv2_0333_1_95 106983 109127 + B12-binding
CAZyme HRGMv2_0333_1 HRGMv2_0333_1_96 109547 111238 + GT3
CAZyme HRGMv2_0333_1 HRGMv2_0333_1_97 111285 113840 + GT35
Gene ID: HRGMv2_0333_1_86
Type: CAZyme
Location: 95176 - 96525 (+)
Gene ID: HRGMv2_0333_1_87
Type: pfam
Location: 96543 - 97295 (+)
Gene ID: HRGMv2_0333_1_88
Type: TC
Location: 97373 - 99052 (+)
Gene ID: HRGMv2_0333_1_89
Type: TF
Location: 99307 - 99894 (-)
Gene ID: HRGMv2_0333_1_90
Type: TC
Location: 100004 - 101161 (-)
Gene ID: HRGMv2_0333_1_91
Type: pfam
Location: 101277 - 101720 (-)
Gene ID: HRGMv2_0333_1_92
Type: pfam
Location: 101778 - 102743 (-)
Gene ID: HRGMv2_0333_1_93
Type: TC
Location: 102883 - 104571 (-)
Gene ID: HRGMv2_0333_1_94
Type: pfam
Location: 105124 - 106986 (+)
Gene ID: HRGMv2_0333_1_95
Type: STP
Location: 106983 - 109127 (+)
Gene ID: HRGMv2_0333_1_96
Type: CAZyme
Location: 109547 - 111238 (+)
Gene ID: HRGMv2_0333_1_97
Type: CAZyme
Location: 111285 - 113840 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0333_1_97 vegan > omnivore 1.48016 0.00566

🧭 Explore Read Mapping of CGC

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