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Cluster: HRGMv2_0333_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0333_2 HRGMv2_0333_2_15 17960 19141 - 9.B.169.1.1
NULL(UNKNOWN) HRGMv2_0333_2 HRGMv2_0333_2_16 19411 19638 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0333_2 HRGMv2_0333_2_17 19865 20602 + GT2
TC HRGMv2_0333_2 HRGMv2_0333_2_18 20595 21236 + 2.A.123.4.1
CAZyme HRGMv2_0333_2 HRGMv2_0333_2_19 21233 22774 + GT83
pfam HRGMv2_0333_2 HRGMv2_0333_2_20 22788 23801 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC HRGMv2_0333_2 HRGMv2_0333_2_21 24163 25632 + 2.A.1.1.3
TC HRGMv2_0333_2 HRGMv2_0333_2_22 25801 27180 - 2.A.66.1.32
CAZyme HRGMv2_0333_2 HRGMv2_0333_2_23 27556 29529 + GH8
NULL(UNKNOWN) HRGMv2_0333_2 HRGMv2_0333_2_24 29560 31332 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0333_2 HRGMv2_0333_2_25 31648 32088 - Bac_DNA_binding | HU-HIG
TC HRGMv2_0333_2 HRGMv2_0333_2_26 32743 34164 + 2.A.79.1.3
Gene ID: HRGMv2_0333_2_15
Type: TC
Location: 17960 - 19141 (-)
Gene ID: HRGMv2_0333_2_16
Type:
Location: 19411 - 19638 (+)
Gene ID: HRGMv2_0333_2_17
Type: CAZyme
Location: 19865 - 20602 (+)
Gene ID: HRGMv2_0333_2_18
Type: TC
Location: 20595 - 21236 (+)
Gene ID: HRGMv2_0333_2_19
Type: CAZyme
Location: 21233 - 22774 (+)
Gene ID: HRGMv2_0333_2_20
Type: pfam
Location: 22788 - 23801 (+)
Gene ID: HRGMv2_0333_2_21
Type: TC
Location: 24163 - 25632 (+)
Gene ID: HRGMv2_0333_2_22
Type: TC
Location: 25801 - 27180 (-)
Gene ID: HRGMv2_0333_2_23
Type: CAZyme
Location: 27556 - 29529 (+)
Gene ID: HRGMv2_0333_2_24
Type:
Location: 29560 - 31332 (+)
Gene ID: HRGMv2_0333_2_25
Type: pfam
Location: 31648 - 32088 (-)
Gene ID: HRGMv2_0333_2_26
Type: TC
Location: 32743 - 34164 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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