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Cluster: HRGMv2_0333_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0333_30 HRGMv2_0333_30_4 1719 3401 - GH13_38
pfam HRGMv2_0333_30 HRGMv2_0333_30_5 3523 4410 - Acyl_transf_1
pfam HRGMv2_0333_30 HRGMv2_0333_30_6 4932 6278 + NQRA_N | NQRA_SLBB | NQRA_2nd
TC HRGMv2_0333_30 HRGMv2_0333_30_7 6357 7511 + 3.D.5.1.1
pfam HRGMv2_0333_30 HRGMv2_0333_30_8 7515 8258 + FMN_bind
TC HRGMv2_0333_30 HRGMv2_0333_30_9 8270 8890 + 3.D.5.1.1
TC HRGMv2_0333_30 HRGMv2_0333_30_10 8954 9580 + 3.D.5.1.1
TC HRGMv2_0333_30 HRGMv2_0333_30_11 9605 10873 + 3.D.5.1.1
Gene ID: HRGMv2_0333_30_4
Type: CAZyme
Location: 1719 - 3401 (-)
Gene ID: HRGMv2_0333_30_5
Type: pfam
Location: 3523 - 4410 (-)
Gene ID: HRGMv2_0333_30_6
Type: pfam
Location: 4932 - 6278 (+)
Gene ID: HRGMv2_0333_30_7
Type: TC
Location: 6357 - 7511 (+)
Gene ID: HRGMv2_0333_30_8
Type: pfam
Location: 7515 - 8258 (+)
Gene ID: HRGMv2_0333_30_9
Type: TC
Location: 8270 - 8890 (+)
Gene ID: HRGMv2_0333_30_10
Type: TC
Location: 8954 - 9580 (+)
Gene ID: HRGMv2_0333_30_11
Type: TC
Location: 9605 - 10873 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0333_30_5 vegan > omnivore 1.07635 0.00566

🧭 Explore Read Mapping of CGC

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