Cluster: HRGMv2_0333_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_0333
- CGC Family ID: CGCFAM_09614
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0333_4 | HRGMv2_0333_4_107 | 135994 | 139206 | + | GH2 |
| CAZyme | HRGMv2_0333_4 | HRGMv2_0333_4_108 | 139253 | 142693 | + | CBM32 |
| sulfatase | HRGMv2_0333_4 | HRGMv2_0333_4_109 | 142706 | 144040 | + | S1_15 |
| CAZyme | HRGMv2_0333_4 | HRGMv2_0333_4_110 | 144227 | 145240 | + | GH43_2 |
| pfam | HRGMv2_0333_4 | HRGMv2_0333_4_111 | 145440 | 147968 | - | Kelch_1 | Kelch_KLHDC2_KLHL20_DRC7 |
| CAZyme | HRGMv2_0333_4 | HRGMv2_0333_4_112 | 148221 | 150527 | + | GH92 |
| TC | HRGMv2_0333_4 | HRGMv2_0333_4_113 | 150946 | 154254 | + | 1.B.14.6.2 |
| TC | HRGMv2_0333_4 | HRGMv2_0333_4_114 | 154270 | 156303 | + | 8.A.46.2.1 |
| pfam | HRGMv2_0333_4 | HRGMv2_0333_4_115 | 156322 | 157581 | + | Glyco_tran_WbsX |
| pfam | HRGMv2_0333_4 | HRGMv2_0333_4_116 | 157595 | 159694 | + | BACON | BACON | LRR_5 |
| CAZyme | HRGMv2_0333_4 | HRGMv2_0333_4_117 | 160036 | 162033 | + | CBM6 | GH43_2 |
| CAZyme | HRGMv2_0333_4 | HRGMv2_0333_4_118 | 162272 | 164779 | + | CBM6 | CBM6 | GH43_2 |
| CAZyme | HRGMv2_0333_4 | HRGMv2_0333_4_119 | 165056 | 168745 | + | GH2 |
Gene ID: HRGMv2_0333_4_107
Type: CAZyme
Location: 135994 - 139206 (+)
Type: CAZyme
Location: 135994 - 139206 (+)
Gene ID: HRGMv2_0333_4_108
Type: CAZyme
Location: 139253 - 142693 (+)
Type: CAZyme
Location: 139253 - 142693 (+)
Gene ID: HRGMv2_0333_4_109
Type: sulfatase
Location: 142706 - 144040 (+)
Type: sulfatase
Location: 142706 - 144040 (+)
Gene ID: HRGMv2_0333_4_110
Type: CAZyme
Location: 144227 - 145240 (+)
Type: CAZyme
Location: 144227 - 145240 (+)
Gene ID: HRGMv2_0333_4_111
Type: pfam
Location: 145440 - 147968 (-)
Type: pfam
Location: 145440 - 147968 (-)
Gene ID: HRGMv2_0333_4_112
Type: CAZyme
Location: 148221 - 150527 (+)
Type: CAZyme
Location: 148221 - 150527 (+)
Gene ID: HRGMv2_0333_4_113
Type: TC
Location: 150946 - 154254 (+)
Type: TC
Location: 150946 - 154254 (+)
Gene ID: HRGMv2_0333_4_114
Type: TC
Location: 154270 - 156303 (+)
Type: TC
Location: 154270 - 156303 (+)
Gene ID: HRGMv2_0333_4_115
Type: pfam
Location: 156322 - 157581 (+)
Type: pfam
Location: 156322 - 157581 (+)
Gene ID: HRGMv2_0333_4_116
Type: pfam
Location: 157595 - 159694 (+)
Type: pfam
Location: 157595 - 159694 (+)
Gene ID: HRGMv2_0333_4_117
Type: CAZyme
Location: 160036 - 162033 (+)
Type: CAZyme
Location: 160036 - 162033 (+)
Gene ID: HRGMv2_0333_4_118
Type: CAZyme
Location: 162272 - 164779 (+)
Type: CAZyme
Location: 162272 - 164779 (+)
Gene ID: HRGMv2_0333_4_119
Type: CAZyme
Location: 165056 - 168745 (+)
Type: CAZyme
Location: 165056 - 168745 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900551055
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.