dbCAN Logo

Cluster: HRGMv2_0333_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0333_1 HRGMv2_0333_1_37 44023 44763 - GT51
TC HRGMv2_0333_1 HRGMv2_0333_1_38 44886 45593 - 9.B.186.1.3
NULL(UNKNOWN) HRGMv2_0333_1 HRGMv2_0333_1_39 45837 46073 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0333_1 HRGMv2_0333_1_40 46083 46196 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0333_1 HRGMv2_0333_1_41 46376 48961 + 3.A.9.1.2
pfam HRGMv2_0333_1 HRGMv2_0333_1_42 49687 50601 - DUF5715
CAZyme HRGMv2_0333_1 HRGMv2_0333_1_43 50777 52189 - GH57
CAZyme HRGMv2_0333_1 HRGMv2_0333_1_44 52227 53501 - GT4
CAZyme HRGMv2_0333_1 HRGMv2_0333_1_45 53516 55429 - GH133
Gene ID: HRGMv2_0333_1_37
Type: CAZyme
Location: 44023 - 44763 (-)
Gene ID: HRGMv2_0333_1_38
Type: TC
Location: 44886 - 45593 (-)
Gene ID: HRGMv2_0333_1_39
Type:
Location: 45837 - 46073 (-)
Gene ID: HRGMv2_0333_1_40
Type:
Location: 46083 - 46196 (-)
Gene ID: HRGMv2_0333_1_41
Type: TC
Location: 46376 - 48961 (+)
Gene ID: HRGMv2_0333_1_42
Type: pfam
Location: 49687 - 50601 (-)
Gene ID: HRGMv2_0333_1_43
Type: CAZyme
Location: 50777 - 52189 (-)
Gene ID: HRGMv2_0333_1_44
Type: CAZyme
Location: 52227 - 53501 (-)
Gene ID: HRGMv2_0333_1_45
Type: CAZyme
Location: 53516 - 55429 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List