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Cluster: HRGMv2_0333_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0333_37 HRGMv2_0333_37_12 13194 15455 - GH3
CAZyme HRGMv2_0333_37 HRGMv2_0333_37_13 15463 17694 - GH3
pfam HRGMv2_0333_37 HRGMv2_0333_37_14 17968 19515 - SusD_RagB | SusD-like_3
TC HRGMv2_0333_37 HRGMv2_0333_37_15 19564 22734 - 1.B.14.6.1
TC HRGMv2_0333_37 HRGMv2_0333_37_16 23552 25420 + 3.A.18.1.1
NULL(UNKNOWN) HRGMv2_0333_37 HRGMv2_0333_37_17 25534 25743 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0333_37 HRGMv2_0333_37_18 25999 27138 + 2.A.6.1.15
TC HRGMv2_0333_37 HRGMv2_0333_37_19 27282 29534 + 2.A.6.1.5
Gene ID: HRGMv2_0333_37_12
Type: CAZyme
Location: 13194 - 15455 (-)
Gene ID: HRGMv2_0333_37_13
Type: CAZyme
Location: 15463 - 17694 (-)
Gene ID: HRGMv2_0333_37_14
Type: pfam
Location: 17968 - 19515 (-)
Gene ID: HRGMv2_0333_37_15
Type: TC
Location: 19564 - 22734 (-)
Gene ID: HRGMv2_0333_37_16
Type: TC
Location: 23552 - 25420 (+)
Gene ID: HRGMv2_0333_37_17
Type:
Location: 25534 - 25743 (-)
Gene ID: HRGMv2_0333_37_18
Type: TC
Location: 25999 - 27138 (+)
Gene ID: HRGMv2_0333_37_19
Type: TC
Location: 27282 - 29534 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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