dbCAN HGM

Cluster: HRGMv2_0333_CGC6

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0333_2	HRGMv2_0333_2_83	104172	106796	+	GH95
CAZyme	HRGMv2_0333_2	HRGMv2_0333_2_84	107689	108654	-	GH43_1
CAZyme	HRGMv2_0333_2	HRGMv2_0333_2_85	108754	109869	-	GH10
TC	HRGMv2_0333_2	HRGMv2_0333_2_86	109877	111301	-	2.A.2.3.2
NULL(UNKNOWN)	HRGMv2_0333_2	HRGMv2_0333_2_87	111286	111384	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	HRGMv2_0333_2	HRGMv2_0333_2_88	111473	114058	+	GH115
TF	HRGMv2_0333_2	HRGMv2_0333_2_89	114338	118324	+	HTH_AraC
CAZyme	HRGMv2_0333_2	HRGMv2_0333_2_90	118332	120257	+	GH67
CAZyme	HRGMv2_0333_2	HRGMv2_0333_2_91	120262	122079	+	GH35

Gene ID: HRGMv2_0333_2_83
Type: CAZyme
Location: 104172 - 106796 (+)

Gene ID: HRGMv2_0333_2_84
Type: CAZyme
Location: 107689 - 108654 (-)

Gene ID: HRGMv2_0333_2_85
Type: CAZyme
Location: 108754 - 109869 (-)

Gene ID: HRGMv2_0333_2_86
Type: TC
Location: 109877 - 111301 (-)

Gene ID: HRGMv2_0333_2_87
Type:
Location: 111286 - 111384 (-)

Gene ID: HRGMv2_0333_2_88
Type: CAZyme
Location: 111473 - 114058 (+)

Gene ID: HRGMv2_0333_2_89
Type: TF
Location: 114338 - 118324 (+)

Gene ID: HRGMv2_0333_2_90
Type: CAZyme
Location: 118332 - 120257 (+)

Gene ID: HRGMv2_0333_2_91
Type: CAZyme
Location: 120262 - 122079 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.