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Genome Details

Selected Rep_genome_ID: HRGMv2_0305
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Prevotella
→
Species
Prevotella sp900554695
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0305 3,233,469 98.87% 0% Japan Asia HRGM
MGYG000001034 3,004,037 97.22% 0% Sweden Europe UHGG
ShaoY_2019_ERR3406007_bin.18 3,101,597 95.55% 0.308% UK Europe ELGG
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0305_CGC29 CGCFAM_00006 Yes 5 1
HRGMv2_0305_CGC11 CGCFAM_00048 Yes 9 3
HRGMv2_0305_CGC45 CGCFAM_00081 Yes 13 2
HRGMv2_0305_CGC25 CGCFAM_00109 Yes 6 2 host glycan
HRGMv2_0305_CGC33 CGCFAM_00181 Yes 8 1
HRGMv2_0305_CGC17 CGCFAM_00183 Yes 6 2 pectin/host glycan
HRGMv2_0305_CGC35 CGCFAM_00468 Yes 5 1
HRGMv2_0305_CGC43 CGCFAM_00523 Yes 4 1
HRGMv2_0305_CGC44 CGCFAM_00648 Yes 8 3
HRGMv2_0305_CGC34 CGCFAM_00776 Yes 8 1
HRGMv2_0305_CGC15 CGCFAM_00820 Yes 9 4 beta-glucan
HRGMv2_0305_CGC28 CGCFAM_00837 Yes 5 2
HRGMv2_0305_CGC31 CGCFAM_00980 Yes 3 1
HRGMv2_0305_CGC10 CGCFAM_02091 Yes 5 3
HRGMv2_0305_CGC36 CGCFAM_02386 Yes 8 2
HRGMv2_0305_CGC20 CGCFAM_02870 Yes 3 1
HRGMv2_0305_CGC12 CGCFAM_03044 Yes 3 1
HRGMv2_0305_CGC39 CGCFAM_03986 Yes 3 1
HRGMv2_0305_CGC19 CGCFAM_04197 Yes 5 3
HRGMv2_0305_CGC47 CGCFAM_04562 Yes 5 1
HRGMv2_0305_CGC5 CGCFAM_05820 Yes 3 1
HRGMv2_0305_CGC16 CGCFAM_05970 Yes 5 1
HRGMv2_0305_CGC37 CGCFAM_05971 Yes 10 3
HRGMv2_0305_CGC48 CGCFAM_05972 Yes 5 1
HRGMv2_0305_CGC6 CGCFAM_05973 Yes 9 1
Top CAZyme Families