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Cluster: HRGMv2_0305_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0305_7 HRGMv2_0305_7_16 15942 18026 + 3.A.16.1.1
pfam HRGMv2_0305_7 HRGMv2_0305_7_17 18044 18913 + CTP_transf_1 | CarS-like
CAZyme HRGMv2_0305_7 HRGMv2_0305_7_18 19018 20421 + GH109
CAZyme HRGMv2_0305_7 HRGMv2_0305_7_19 21302 22471 - GT19
pfam HRGMv2_0305_7 HRGMv2_0305_7_20 22486 23256 - SurE
TC HRGMv2_0305_7 HRGMv2_0305_7_21 23429 24193 + 8.A.3.2.3
pfam HRGMv2_0305_7 HRGMv2_0305_7_22 24333 25259 + ParBc | HTH_ParB | ParB_dimer
pfam HRGMv2_0305_7 HRGMv2_0305_7_23 25310 26008 + DUF5683
CAZyme HRGMv2_0305_7 HRGMv2_0305_7_24 26073 27377 + GH23
Gene ID: HRGMv2_0305_7_16
Type: TC
Location: 15942 - 18026 (+)
Gene ID: HRGMv2_0305_7_17
Type: pfam
Location: 18044 - 18913 (+)
Gene ID: HRGMv2_0305_7_18
Type: CAZyme
Location: 19018 - 20421 (+)
Gene ID: HRGMv2_0305_7_19
Type: CAZyme
Location: 21302 - 22471 (-)
Gene ID: HRGMv2_0305_7_20
Type: pfam
Location: 22486 - 23256 (-)
Gene ID: HRGMv2_0305_7_21
Type: TC
Location: 23429 - 24193 (+)
Gene ID: HRGMv2_0305_7_22
Type: pfam
Location: 24333 - 25259 (+)
Gene ID: HRGMv2_0305_7_23
Type: pfam
Location: 25310 - 26008 (+)
Gene ID: HRGMv2_0305_7_24
Type: CAZyme
Location: 26073 - 27377 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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