Cluster: HRGMv2_0305_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0305
- CGC Family ID: CGCFAM_00468
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0305_22 | HRGMv2_0305_22_37 | 42548 | 43834 | + | 2.A.35.1.5 |
| NULL(UNKNOWN) | HRGMv2_0305_22 | HRGMv2_0305_22_38 | 43837 | 44661 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0305_22 | HRGMv2_0305_22_39 | 44694 | 45452 | + | GH25 |
| pfam | HRGMv2_0305_22 | HRGMv2_0305_22_40 | 45467 | 46567 | + | DZR | Zn_ribbon_3 |
| TC | HRGMv2_0305_22 | HRGMv2_0305_22_41 | 46729 | 48678 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_0305_22_37
Type: TC
Location: 42548 - 43834 (+)
Type: TC
Location: 42548 - 43834 (+)
Gene ID: HRGMv2_0305_22_38
Type:
Location: 43837 - 44661 (+)
Type:
Location: 43837 - 44661 (+)
Gene ID: HRGMv2_0305_22_39
Type: CAZyme
Location: 44694 - 45452 (+)
Type: CAZyme
Location: 44694 - 45452 (+)
Gene ID: HRGMv2_0305_22_40
Type: pfam
Location: 45467 - 46567 (+)
Type: pfam
Location: 45467 - 46567 (+)
Gene ID: HRGMv2_0305_22_41
Type: TC
Location: 46729 - 48678 (+)
Type: TC
Location: 46729 - 48678 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900554695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.