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Cluster: HRGMv2_0305_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0305_9 HRGMv2_0305_9_38 40394 41791 - 2.A.2.3.6
CAZyme HRGMv2_0305_9 HRGMv2_0305_9_39 41982 43160 - GH130_1
CAZyme HRGMv2_0305_9 HRGMv2_0305_9_40 43221 44300 - GH26
NULL(UNKNOWN) HRGMv2_0305_9 HRGMv2_0305_9_41 44488 44823 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0305_9 HRGMv2_0305_9_42 45400 46830 - GH26
pfam HRGMv2_0305_9 HRGMv2_0305_9_43 46859 48067 - SGBP_B_XBD
TC HRGMv2_0305_9 HRGMv2_0305_9_44 48082 49824 - 8.A.46.1.6
TC HRGMv2_0305_9 HRGMv2_0305_9_45 49851 53036 - 1.B.14.6.1
CAZyme HRGMv2_0305_9 HRGMv2_0305_9_46 53096 54370 - GH27
Gene ID: HRGMv2_0305_9_38
Type: TC
Location: 40394 - 41791 (-)
Gene ID: HRGMv2_0305_9_39
Type: CAZyme
Location: 41982 - 43160 (-)
Gene ID: HRGMv2_0305_9_40
Type: CAZyme
Location: 43221 - 44300 (-)
Gene ID: HRGMv2_0305_9_41
Type:
Location: 44488 - 44823 (-)
Gene ID: HRGMv2_0305_9_42
Type: CAZyme
Location: 45400 - 46830 (-)
Gene ID: HRGMv2_0305_9_43
Type: pfam
Location: 46859 - 48067 (-)
Gene ID: HRGMv2_0305_9_44
Type: TC
Location: 48082 - 49824 (-)
Gene ID: HRGMv2_0305_9_45
Type: TC
Location: 49851 - 53036 (-)
Gene ID: HRGMv2_0305_9_46
Type: CAZyme
Location: 53096 - 54370 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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