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Cluster: HRGMv2_0305_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0305_22 HRGMv2_0305_22_20 19400 21088 - 2.A.81.1.2
pfam HRGMv2_0305_22 HRGMv2_0305_22_21 21116 22594 - tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
TC HRGMv2_0305_22 HRGMv2_0305_22_22 22727 23404 + 9.B.186.1.3
CAZyme HRGMv2_0305_22 HRGMv2_0305_22_23 23503 24243 + GT51
pfam HRGMv2_0305_22 HRGMv2_0305_22_24 24258 26510 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
pfam HRGMv2_0305_22 HRGMv2_0305_22_25 26653 27546 + DHDPS
TC HRGMv2_0305_22 HRGMv2_0305_22_26 27682 28719 + 3.A.1.13.2
TC HRGMv2_0305_22 HRGMv2_0305_22_27 28738 30009 + 9.A.40.2.4
Gene ID: HRGMv2_0305_22_20
Type: TC
Location: 19400 - 21088 (-)
Gene ID: HRGMv2_0305_22_21
Type: pfam
Location: 21116 - 22594 (-)
Gene ID: HRGMv2_0305_22_22
Type: TC
Location: 22727 - 23404 (+)
Gene ID: HRGMv2_0305_22_23
Type: CAZyme
Location: 23503 - 24243 (+)
Gene ID: HRGMv2_0305_22_24
Type: pfam
Location: 24258 - 26510 (+)
Gene ID: HRGMv2_0305_22_25
Type: pfam
Location: 26653 - 27546 (+)
Gene ID: HRGMv2_0305_22_26
Type: TC
Location: 27682 - 28719 (+)
Gene ID: HRGMv2_0305_22_27
Type: TC
Location: 28738 - 30009 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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