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Cluster: HRGMv2_0305_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0305_21 HRGMv2_0305_21_37 43849 44739 - GT2
NULL(UNKNOWN) HRGMv2_0305_21 HRGMv2_0305_21_38 45285 45422 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0305_21 HRGMv2_0305_21_39 46198 47598 + 2.A.62.1.3
pfam HRGMv2_0305_21 HRGMv2_0305_21_40 47623 48600 + PFK
TC HRGMv2_0305_21 HRGMv2_0305_21_41 48732 50261 + 3.A.2.1.2
pfam HRGMv2_0305_21 HRGMv2_0305_21_42 50275 50517 + ATP-synt_DE_N
NULL(UNKNOWN) HRGMv2_0305_21 HRGMv2_0305_21_43 50536 50931 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0305_21 HRGMv2_0305_21_44 50950 52014 + 3.A.2.1.7
Gene ID: HRGMv2_0305_21_37
Type: CAZyme
Location: 43849 - 44739 (-)
Gene ID: HRGMv2_0305_21_38
Type:
Location: 45285 - 45422 (-)
Gene ID: HRGMv2_0305_21_39
Type: TC
Location: 46198 - 47598 (+)
Gene ID: HRGMv2_0305_21_40
Type: pfam
Location: 47623 - 48600 (+)
Gene ID: HRGMv2_0305_21_41
Type: TC
Location: 48732 - 50261 (+)
Gene ID: HRGMv2_0305_21_42
Type: pfam
Location: 50275 - 50517 (+)
Gene ID: HRGMv2_0305_21_43
Type:
Location: 50536 - 50931 (+)
Gene ID: HRGMv2_0305_21_44
Type: TC
Location: 50950 - 52014 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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