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Cluster: HRGMv2_0305_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0305_37 HRGMv2_0305_37_3 1698 4052 + GH92
CAZyme HRGMv2_0305_37 HRGMv2_0305_37_4 4142 6793 + GH78
TF HRGMv2_0305_37 HRGMv2_0305_37_5 7464 8042 + GerE
STP HRGMv2_0305_37 HRGMv2_0305_37_6 8103 9092 + FecR
TC HRGMv2_0305_37 HRGMv2_0305_37_7 9358 12831 + 1.B.14.6.2
TC HRGMv2_0305_37 HRGMv2_0305_37_8 12920 14791 + 8.A.46.2.2
NULL(UNKNOWN) HRGMv2_0305_37 HRGMv2_0305_37_9 14918 15097 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0305_37 HRGMv2_0305_37_10 15109 19344 + CBM32 | GH85
Gene ID: HRGMv2_0305_37_3
Type: CAZyme
Location: 1698 - 4052 (+)
Gene ID: HRGMv2_0305_37_4
Type: CAZyme
Location: 4142 - 6793 (+)
Gene ID: HRGMv2_0305_37_5
Type: TF
Location: 7464 - 8042 (+)
Gene ID: HRGMv2_0305_37_6
Type: STP
Location: 8103 - 9092 (+)
Gene ID: HRGMv2_0305_37_7
Type: TC
Location: 9358 - 12831 (+)
Gene ID: HRGMv2_0305_37_8
Type: TC
Location: 12920 - 14791 (+)
Gene ID: HRGMv2_0305_37_9
Type:
Location: 14918 - 15097 (+)
Gene ID: HRGMv2_0305_37_10
Type: CAZyme
Location: 15109 - 19344 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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