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Cluster: HRGMv2_0305_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0305_25 HRGMv2_0305_25_26 31586 32521 + CBM50
pfam HRGMv2_0305_25 HRGMv2_0305_25_27 32704 33267 + PAP2
CAZyme HRGMv2_0305_25 HRGMv2_0305_25_28 33456 36155 + GH77
peptidase HRGMv2_0305_25 HRGMv2_0305_25_29 36409 37407 + M28.UPA
TC HRGMv2_0305_25 HRGMv2_0305_25_30 37646 38221 - 2.A.51.1.6
TC HRGMv2_0305_25 HRGMv2_0305_25_31 38218 38826 - 2.A.51.1.6
peptidase HRGMv2_0305_25 HRGMv2_0305_25_32 38952 42683 - C56.972
TC HRGMv2_0305_25 HRGMv2_0305_25_33 43143 43559 - 9.B.35.1.2
pfam HRGMv2_0305_25 HRGMv2_0305_25_34 43736 44812 - DUF4421
CAZyme HRGMv2_0305_25 HRGMv2_0305_25_35 44938 46428 - GH32
Gene ID: HRGMv2_0305_25_26
Type: CAZyme
Location: 31586 - 32521 (+)
Gene ID: HRGMv2_0305_25_27
Type: pfam
Location: 32704 - 33267 (+)
Gene ID: HRGMv2_0305_25_28
Type: CAZyme
Location: 33456 - 36155 (+)
Gene ID: HRGMv2_0305_25_29
Type: peptidase
Location: 36409 - 37407 (+)
Gene ID: HRGMv2_0305_25_30
Type: TC
Location: 37646 - 38221 (-)
Gene ID: HRGMv2_0305_25_31
Type: TC
Location: 38218 - 38826 (-)
Gene ID: HRGMv2_0305_25_32
Type: peptidase
Location: 38952 - 42683 (-)
Gene ID: HRGMv2_0305_25_33
Type: TC
Location: 43143 - 43559 (-)
Gene ID: HRGMv2_0305_25_34
Type: pfam
Location: 43736 - 44812 (-)
Gene ID: HRGMv2_0305_25_35
Type: CAZyme
Location: 44938 - 46428 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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