dbCAN Logo

Cluster: HRGMv2_0305_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0305_3 HRGMv2_0305_3_47 60857 62389 - 8.A.46.3.2
TC HRGMv2_0305_3 HRGMv2_0305_3_48 62409 65375 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0305_3 HRGMv2_0305_3_49 65817 66107 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0305_3 HRGMv2_0305_3_50 66193 67185 - Phage_integrase | Phage_int_SAM_5 | Phage_int_SAM_4
TC HRGMv2_0305_3 HRGMv2_0305_3_51 67898 70876 + 1.B.14.6.1
TC HRGMv2_0305_3 HRGMv2_0305_3_52 70901 72442 + 8.A.46.3.2
pfam HRGMv2_0305_3 HRGMv2_0305_3_53 72484 73395 + Calx-beta
peptidase HRGMv2_0305_3 HRGMv2_0305_3_54 73474 75168 + C10.UPW
CAZyme HRGMv2_0305_3 HRGMv2_0305_3_55 75360 77321 - GH36
Gene ID: HRGMv2_0305_3_47
Type: TC
Location: 60857 - 62389 (-)
Gene ID: HRGMv2_0305_3_48
Type: TC
Location: 62409 - 65375 (-)
Gene ID: HRGMv2_0305_3_49
Type:
Location: 65817 - 66107 (-)
Gene ID: HRGMv2_0305_3_50
Type: pfam
Location: 66193 - 67185 (-)
Gene ID: HRGMv2_0305_3_51
Type: TC
Location: 67898 - 70876 (+)
Gene ID: HRGMv2_0305_3_52
Type: TC
Location: 70901 - 72442 (+)
Gene ID: HRGMv2_0305_3_53
Type: pfam
Location: 72484 - 73395 (+)
Gene ID: HRGMv2_0305_3_54
Type: peptidase
Location: 73474 - 75168 (+)
Gene ID: HRGMv2_0305_3_55
Type: CAZyme
Location: 75360 - 77321 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List