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Cluster: HRGMv2_0305_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0305_25 HRGMv2_0305_25_1 820 4401 - GH2
NULL(UNKNOWN) HRGMv2_0305_25 HRGMv2_0305_25_2 4874 5032 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0305_25 HRGMv2_0305_25_3 5080 6747 + GH32
pfam HRGMv2_0305_25 HRGMv2_0305_25_4 7074 8189 - HlyD_3 | HlyD_D23
TC HRGMv2_0305_25 HRGMv2_0305_25_5 8293 9537 - 3.A.1.122.2
TC HRGMv2_0305_25 HRGMv2_0305_25_6 9584 10846 - 3.A.1.122.2
TC HRGMv2_0305_25 HRGMv2_0305_25_7 10857 11582 - 3.A.1.122.2
TC HRGMv2_0305_25 HRGMv2_0305_25_8 11662 13341 - 3.A.1.106.3
Gene ID: HRGMv2_0305_25_1
Type: CAZyme
Location: 820 - 4401 (-)
Gene ID: HRGMv2_0305_25_2
Type:
Location: 4874 - 5032 (+)
Gene ID: HRGMv2_0305_25_3
Type: CAZyme
Location: 5080 - 6747 (+)
Gene ID: HRGMv2_0305_25_4
Type: pfam
Location: 7074 - 8189 (-)
Gene ID: HRGMv2_0305_25_5
Type: TC
Location: 8293 - 9537 (-)
Gene ID: HRGMv2_0305_25_6
Type: TC
Location: 9584 - 10846 (-)
Gene ID: HRGMv2_0305_25_7
Type: TC
Location: 10857 - 11582 (-)
Gene ID: HRGMv2_0305_25_8
Type: TC
Location: 11662 - 13341 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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