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Cluster: HRGMv2_0305_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0305_38 HRGMv2_0305_38_11 8490 8840 + 3.D.1.8.1
TC HRGMv2_0305_38 HRGMv2_0305_38_12 8831 9487 + 3.D.1.3.1
TC HRGMv2_0305_38 HRGMv2_0305_38_13 9501 11069 + 3.D.1.5.1
TC HRGMv2_0305_38 HRGMv2_0305_38_14 11098 12180 + 3.D.1.5.1
STP HRGMv2_0305_38 HRGMv2_0305_38_15 12301 12765 + Fer4 | Fer4
TC HRGMv2_0305_38 HRGMv2_0305_38_16 12789 13295 + 3.D.9.1.1
TC HRGMv2_0305_38 HRGMv2_0305_38_17 13299 13607 + 3.D.1.8.1
TC HRGMv2_0305_38 HRGMv2_0305_38_18 13613 15592 + 3.D.1.2.1
TC HRGMv2_0305_38 HRGMv2_0305_38_19 15651 17156 + 3.D.1.5.1
TC HRGMv2_0305_38 HRGMv2_0305_38_20 17173 18612 + 3.D.1.8.1
NULL(UNKNOWN) HRGMv2_0305_38 HRGMv2_0305_38_21 19736 20155 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0305_38 HRGMv2_0305_38_22 20287 21954 + GT3
CAZyme HRGMv2_0305_38 HRGMv2_0305_38_23 21968 24523 + GT35
Gene ID: HRGMv2_0305_38_11
Type: TC
Location: 8490 - 8840 (+)
Gene ID: HRGMv2_0305_38_12
Type: TC
Location: 8831 - 9487 (+)
Gene ID: HRGMv2_0305_38_13
Type: TC
Location: 9501 - 11069 (+)
Gene ID: HRGMv2_0305_38_14
Type: TC
Location: 11098 - 12180 (+)
Gene ID: HRGMv2_0305_38_15
Type: STP
Location: 12301 - 12765 (+)
Gene ID: HRGMv2_0305_38_16
Type: TC
Location: 12789 - 13295 (+)
Gene ID: HRGMv2_0305_38_17
Type: TC
Location: 13299 - 13607 (+)
Gene ID: HRGMv2_0305_38_18
Type: TC
Location: 13613 - 15592 (+)
Gene ID: HRGMv2_0305_38_19
Type: TC
Location: 15651 - 17156 (+)
Gene ID: HRGMv2_0305_38_20
Type: TC
Location: 17173 - 18612 (+)
Gene ID: HRGMv2_0305_38_21
Type:
Location: 19736 - 20155 (-)
Gene ID: HRGMv2_0305_38_22
Type: CAZyme
Location: 20287 - 21954 (+)
Gene ID: HRGMv2_0305_38_23
Type: CAZyme
Location: 21968 - 24523 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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