Genome Details
Selected Rep_genome_ID: HRGMv2_0299
Total Genomes Found: 3
Total Genomes Found: 3
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553155
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG520_29_sub | 2,895,411 | 98.22% | 0.74% | NA | Africa | H3AfricaPhase2 |
| HRGMv2_0299 | 2,827,670 | 98.51% | 0% | Japan | Asia | HRGM |
| Rep_212 | 2,794,592 | 93.0864% | 1.85185% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0299_CGC6 | CGCFAM_00001 | Yes | 5 | 2 | pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan |
| HRGMv2_0299_CGC15 | CGCFAM_00017 | Yes | 7 | 1 | fructan |
| HRGMv2_0299_CGC29 | CGCFAM_00023 | Yes | 8 | 6 | |
| HRGMv2_0299_CGC16 | CGCFAM_00095 | Yes | 9 | 4 | |
| HRGMv2_0299_CGC23 | CGCFAM_00109 | Yes | 10 | 5 | host glycan |
| HRGMv2_0299_CGC30 | CGCFAM_00143 | Yes | 5 | 1 | |
| HRGMv2_0299_CGC1 | CGCFAM_00254 | Yes | 6 | 3 | |
| HRGMv2_0299_CGC8 | CGCFAM_00296 | Yes | 9 | 2 | |
| HRGMv2_0299_CGC22 | CGCFAM_00303 | Yes | 9 | 3 | |
| HRGMv2_0299_CGC3 | CGCFAM_00478 | Yes | 5 | 1 | |
| HRGMv2_0299_CGC10 | CGCFAM_00482 | Yes | 5 | 1 | fructan |
| HRGMv2_0299_CGC9 | CGCFAM_00604 | Yes | 13 | 1 | |
| HRGMv2_0299_CGC34 | CGCFAM_00776 | Yes | 11 | 3 | |
| HRGMv2_0299_CGC13 | CGCFAM_00893 | Yes | 3 | 1 | |
| HRGMv2_0299_CGC31 | CGCFAM_01162 | Yes | 4 | 1 | |
| HRGMv2_0299_CGC25 | CGCFAM_01645 | Yes | 7 | 2 | |
| HRGMv2_0299_CGC35 | CGCFAM_03063 | Yes | 13 | 5 | |
| HRGMv2_0299_CGC18 | CGCFAM_03064 | Yes | 3 | 1 | |
| HRGMv2_0299_CGC2 | CGCFAM_03073 | Yes | 6 | 1 | |
| HRGMv2_0299_CGC5 | CGCFAM_05961 | Yes | 4 | 1 |
Top CAZyme Families