Cluster: HRGMv2_0299_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0299
- CGC Family ID: CGCFAM_00254
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0299_1 | HRGMv2_0299_1_4 | 3663 | 4676 | + | GT2 |
| pfam | HRGMv2_0299_1 | HRGMv2_0299_1_5 | 4682 | 5395 | + | RadC | UPF0758_N |
| TC | HRGMv2_0299_1 | HRGMv2_0299_1_6 | 5436 | 6896 | - | 2.A.114.1.4 |
| NULL(UNKNOWN) | HRGMv2_0299_1 | HRGMv2_0299_1_7 | 6932 | 7954 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0299_1 | HRGMv2_0299_1_8 | 8093 | 9151 | + | GT2 |
| CAZyme | HRGMv2_0299_1 | HRGMv2_0299_1_9 | 9148 | 10317 | + | GT4 |
Gene ID: HRGMv2_0299_1_4
Type: CAZyme
Location: 3663 - 4676 (+)
Type: CAZyme
Location: 3663 - 4676 (+)
Gene ID: HRGMv2_0299_1_5
Type: pfam
Location: 4682 - 5395 (+)
Type: pfam
Location: 4682 - 5395 (+)
Gene ID: HRGMv2_0299_1_6
Type: TC
Location: 5436 - 6896 (-)
Type: TC
Location: 5436 - 6896 (-)
Gene ID: HRGMv2_0299_1_7
Type:
Location: 6932 - 7954 (-)
Type:
Location: 6932 - 7954 (-)
Gene ID: HRGMv2_0299_1_8
Type: CAZyme
Location: 8093 - 9151 (+)
Type: CAZyme
Location: 8093 - 9151 (+)
Gene ID: HRGMv2_0299_1_9
Type: CAZyme
Location: 9148 - 10317 (+)
Type: CAZyme
Location: 9148 - 10317 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.