PROTEIN: HRGMv2_0299_1_7
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Protein File & Metadata
Source:
HRGMv2_0299_1_7.pdb
Genome ID:
Protein ID:
HRGMv2_0299_1_7
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Protein Sequence
MPLKPYKTDV AVLILFFNRP DHLQKVFDEV RKARPSKLFL YQDGPRGERD MAGIEACRRV 60 VGDIDWECEV HRKFQERNYG CDPSEYISQK WAFSIVDKCI VLEDDDVPSQ SFFPFCKEML 120 DRYEHDERIG MIAGFNPEEQ LNGYPSDYIF TSVFSIWGWA SWRRVIDKWD ASYAFLDDPD 180 AMRQVDGIMR QRRLCRDTLR ACYDHRASGK EYYETIFWAS MLLNSALAIM PTRNLINNLG 240 ATDGSTHYTG SLQTMPRRLR RLFTMKRFEL DAPLRHPKYV VEDVDFKEKV YRTYAYGHPW 300 IKAGRSLEEL WLNLRYGNFG HIARSVANRV AKILGKDKHW 340
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A3P7DV18-F1-model_v4 | 2 | 286 | 31 | 303 | 0.6136 |
0.7337 |
| AF-Q4DMC0-F1-model_v4 | 8 | 291 | 66 | 367 | 0.6133 |
0.7807 |
| AF-Q4D3G6-F1-model_v4 | 5 | 291 | 59 | 367 | 0.613 |
0.7725 |
| AF-A0A044SGH9-F1-model_v4 | 5 | 340 | 11 | 419 | 0.5973 |
0.6828 |
| AF-A0A3P7Q5X9-F1-model_v4 | 7 | 305 | 35 | 339 | 0.589 |
0.6898 |
| AF-A0A0K0ETJ8-F1-model_v4 | 3 | 335 | 22 | 440 | 0.5767 |
0.6775 |
| AF-A0A044SYE9-F1-model_v4 | 8 | 306 | 48 | 397 | 0.5707 |
0.706 |
| AF-G5EBG7-F1-model_v4 | 5 | 340 | 67 | 463 | 0.5666 |
0.6736 |
| AF-A0A3P7EF88-F1-model_v4 | 5 | 339 | 104 | 513 | 0.5509 |
0.6815 |
| AF-A0A3Q0KDL6-F1-model_v4 | 7 | 298 | 65 | 380 | 0.5476 |
0.7055 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Q6IVQ8-F1-model_v4 | GT0 | 3 | 340 | 1 | 338 | 0.9831 |
0.9911 |
| AF-A0A6M4M676-F1-model_v4 | GT0 | 3 | 340 | 1 | 338 | 0.982 |
0.9902 |
| AF-A0A0P0LL34-F1-model_v4 | GT0 | 3 | 340 | 1 | 338 | 0.9819 |
0.99 |
| AF-A0A076J0N4-F1-model_v4 | GT0 | 3 | 340 | 1 | 338 | 0.9814 |
0.9897 |
| A0A1H1AE61 | GT0 | 2 | 340 | 1 | 341 | 0.968 |
0.9782 |
| QWE08948.1 | GT0 | 5 | 316 | 1 | 303 | 0.8653 |
0.9284 |
| AF-A4SVL4-F1-model_v4 | GT0 | 5 | 312 | 1 | 300 | 0.8541 |
0.9228 |
| AF-B2IZQ8-F1-model_v4 | GT0 | 8 | 337 | 1 | 303 | 0.8498 |
0.9183 |
| AF-A0A2L2NV30-F1-model_v4 | GT0 | 8 | 338 | 1 | 302 | 0.8481 |
0.9192 |
| AF-A0A6P1KTQ9-F1-model_v4 | GT0 | 8 | 336 | 1 | 299 | 0.845 |
0.9244 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 7 | 328 | 4 | 300 | 0.7757 |
0.8586 |
| WBV42548.1 | GT13 | 8 | 339 | 12 | 310 | 0.6551 |
0.7247 |
| A0A380KPF0 | GT2 | 8 | 340 | 1 | 275 | 0.6167 |
0.7081 |
| R5FYV9 | GT2 | 1 | 318 | 41 | 589 | 0.6152 |
0.8384 |
| A0A6G7Y068 | GT2 | 8 | 340 | 2 | 280 | 0.6136 |
0.6957 |
| BCN21993.1 | GT2 | 6 | 340 | 1 | 282 | 0.608 |
0.6863 |
| S5RKF7 | GT2 | 8 | 340 | 5 | 278 | 0.6074 |
0.7038 |
| AUC25089.1 | GT2 | 8 | 340 | 5 | 279 | 0.6064 |
0.6956 |
| WED42819.1 | GT2 | 8 | 340 | 2 | 294 | 0.6055 |
0.6779 |
| QEO42451.1 | GT2 | 9 | 340 | 1 | 285 | 0.6043 |
0.6819 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 8 | 298 | 1 | 305 | 0.5931 |
0.7031 |
| 1fo8-assembly1.cif.gz_A | 7 | 298 | 1 | 293 | 0.5741 |
0.6677 |
| 5ggi-assembly1.cif.gz_A | 1 | 298 | 6 | 352 | 0.5707 |
0.7061 |
| 1h7q-assembly1.cif.gz_A | 8 | 340 | 1 | 226 | 0.5496 |
0.6959 |
| 1qgs-assembly1.cif.gz_A | 8 | 297 | 1 | 230 | 0.548 |
0.6802 |
| 1h7l-assembly1.cif.gz_A | 8 | 297 | 1 | 231 | 0.5478 |
0.6784 |
| 5vcm-assembly1.cif.gz_A | 2 | 340 | 21 | 334 | 0.5477 |
0.6144 |
| 5vcm-assembly2.cif.gz_B | 2 | 340 | 29 | 344 | 0.5439 |
0.6124 |
| 5ggi-assembly2.cif.gz_B | 1 | 298 | 163 | 509 | 0.5002 |
0.7047 |
| 5ve7-assembly1.cif.gz_A | 8 | 267 | 2 | 263 | 0.4888 |
0.5914 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39621-F1-model_v4 | 8 | 340 | 2 | 241 | 0.5606 |
0.695 |
| AF-P47306-F1-model_v4 | 8 | 339 | 1 | 262 | 0.5531 |
0.6792 |
| AF-Q11068-F1-model_v4 | 8 | 306 | 91 | 449 | 0.5468 |
0.7115 |
| AF-Q9XGM8-F1-model_v4 | 2 | 306 | 95 | 400 | 0.534 |
0.6777 |
| AF-P26572-F1-model_v4 | 7 | 298 | 103 | 408 | 0.5324 |
0.7045 |
| AF-P27115-F1-model_v4 | 7 | 298 | 105 | 410 | 0.5316 |
0.7046 |
| AF-P27808-F1-model_v4 | 7 | 298 | 105 | 410 | 0.5313 |
0.7044 |
| AF-Q09325-F1-model_v4 | 7 | 298 | 105 | 410 | 0.5303 |
0.703 |
| AF-Q91X88-F1-model_v4 | 1 | 340 | 259 | 660 | 0.4899 |
0.652 |
| AF-Q5RCB9-F1-model_v4 | 1 | 328 | 259 | 660 | 0.4886 |
0.6715 |