Cluster: HRGMv2_0299_CGC35
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0299
- CGC Family ID: CGCFAM_03063
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0299_147 | HRGMv2_0299_147_2 | 2413 | 4743 | - | 3.A.11.3.1 |
| pfam | HRGMv2_0299_147 | HRGMv2_0299_147_3 | 4762 | 5403 | - | OMP_b-brl | OMP_b-brl_2 |
| pfam | HRGMv2_0299_147 | HRGMv2_0299_147_4 | 5432 | 6490 | - | GldN |
| TC | HRGMv2_0299_147 | HRGMv2_0299_147_5 | 6519 | 8063 | - | 9.A.25.1.1 |
| pfam | HRGMv2_0299_147 | HRGMv2_0299_147_6 | 8064 | 8846 | - | GldL_N |
| TC | HRGMv2_0299_147 | HRGMv2_0299_147_7 | 8866 | 10326 | - | 9.A.25.1.1 |
| pfam | HRGMv2_0299_147 | HRGMv2_0299_147_8 | 10341 | 11249 | - | PorP_SprF |
| CAZyme | HRGMv2_0299_147 | HRGMv2_0299_147_9 | 12216 | 14267 | - | GH13_6 |
| CAZyme | HRGMv2_0299_147 | HRGMv2_0299_147_10 | 14319 | 16277 | - | GH13_46 |
| CAZyme | HRGMv2_0299_147 | HRGMv2_0299_147_11 | 16294 | 18216 | - | GH13_14 |
| CAZyme | HRGMv2_0299_147 | HRGMv2_0299_147_12 | 18229 | 20973 | - | GH77 |
| peptidase | HRGMv2_0299_147 | HRGMv2_0299_147_13 | 21660 | 23366 | - | M06.UPW |
| CAZyme | HRGMv2_0299_147 | HRGMv2_0299_147_14 | 23391 | 24593 | - | GH25 |
Gene ID: HRGMv2_0299_147_2
Type: TC
Location: 2413 - 4743 (-)
Type: TC
Location: 2413 - 4743 (-)
Gene ID: HRGMv2_0299_147_3
Type: pfam
Location: 4762 - 5403 (-)
Type: pfam
Location: 4762 - 5403 (-)
Gene ID: HRGMv2_0299_147_4
Type: pfam
Location: 5432 - 6490 (-)
Type: pfam
Location: 5432 - 6490 (-)
Gene ID: HRGMv2_0299_147_5
Type: TC
Location: 6519 - 8063 (-)
Type: TC
Location: 6519 - 8063 (-)
Gene ID: HRGMv2_0299_147_6
Type: pfam
Location: 8064 - 8846 (-)
Type: pfam
Location: 8064 - 8846 (-)
Gene ID: HRGMv2_0299_147_7
Type: TC
Location: 8866 - 10326 (-)
Type: TC
Location: 8866 - 10326 (-)
Gene ID: HRGMv2_0299_147_8
Type: pfam
Location: 10341 - 11249 (-)
Type: pfam
Location: 10341 - 11249 (-)
Gene ID: HRGMv2_0299_147_9
Type: CAZyme
Location: 12216 - 14267 (-)
Type: CAZyme
Location: 12216 - 14267 (-)
Gene ID: HRGMv2_0299_147_10
Type: CAZyme
Location: 14319 - 16277 (-)
Type: CAZyme
Location: 14319 - 16277 (-)
Gene ID: HRGMv2_0299_147_11
Type: CAZyme
Location: 16294 - 18216 (-)
Type: CAZyme
Location: 16294 - 18216 (-)
Gene ID: HRGMv2_0299_147_12
Type: CAZyme
Location: 18229 - 20973 (-)
Type: CAZyme
Location: 18229 - 20973 (-)
Gene ID: HRGMv2_0299_147_13
Type: peptidase
Location: 21660 - 23366 (-)
Type: peptidase
Location: 21660 - 23366 (-)
Gene ID: HRGMv2_0299_147_14
Type: CAZyme
Location: 23391 - 24593 (-)
Type: CAZyme
Location: 23391 - 24593 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900553155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.