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Cluster: HRGMv2_0299_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0299_41 HRGMv2_0299_41_1 77 1048 - 3.A.2.1.1
TC HRGMv2_0299_41 HRGMv2_0299_41_2 1055 2641 - 3.A.2.1.3
pfam HRGMv2_0299_41 HRGMv2_0299_41_3 2659 3192 - OSCP
pfam HRGMv2_0299_41 HRGMv2_0299_41_4 3202 3720 - ATP-synt_B | YMF19
TC HRGMv2_0299_41 HRGMv2_0299_41_5 3771 4013 - 3.A.2.1.6
TC HRGMv2_0299_41 HRGMv2_0299_41_6 4068 5123 - 3.A.2.1.7
NULL(UNKNOWN) HRGMv2_0299_41 HRGMv2_0299_41_7 5130 5558 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0299_41 HRGMv2_0299_41_8 5574 5816 - ATP-synt_DE_N
TC HRGMv2_0299_41 HRGMv2_0299_41_9 5846 7372 - 3.A.2.1.2
pfam HRGMv2_0299_41 HRGMv2_0299_41_10 7525 8502 - PFK
TC HRGMv2_0299_41 HRGMv2_0299_41_11 8541 9935 - 2.A.62.1.3
STP HRGMv2_0299_41 HRGMv2_0299_41_12 10187 10969 + NUDIX
CAZyme HRGMv2_0299_41 HRGMv2_0299_41_13 11060 12043 + GH179
Gene ID: HRGMv2_0299_41_1
Type: TC
Location: 77 - 1048 (-)
Gene ID: HRGMv2_0299_41_2
Type: TC
Location: 1055 - 2641 (-)
Gene ID: HRGMv2_0299_41_3
Type: pfam
Location: 2659 - 3192 (-)
Gene ID: HRGMv2_0299_41_4
Type: pfam
Location: 3202 - 3720 (-)
Gene ID: HRGMv2_0299_41_5
Type: TC
Location: 3771 - 4013 (-)
Gene ID: HRGMv2_0299_41_6
Type: TC
Location: 4068 - 5123 (-)
Gene ID: HRGMv2_0299_41_7
Type:
Location: 5130 - 5558 (-)
Gene ID: HRGMv2_0299_41_8
Type: pfam
Location: 5574 - 5816 (-)
Gene ID: HRGMv2_0299_41_9
Type: TC
Location: 5846 - 7372 (-)
Gene ID: HRGMv2_0299_41_10
Type: pfam
Location: 7525 - 8502 (-)
Gene ID: HRGMv2_0299_41_11
Type: TC
Location: 8541 - 9935 (-)
Gene ID: HRGMv2_0299_41_12
Type: STP
Location: 10187 - 10969 (+)
Gene ID: HRGMv2_0299_41_13
Type: CAZyme
Location: 11060 - 12043 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0299_41_5 vegetarian > omnivore 1.27795 0.04277

🧭 Explore Read Mapping of CGC

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