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Cluster: HRGMv2_0299_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0299_36 HRGMv2_0299_36_5 7900 9513 - 8.A.46.1.1
TC HRGMv2_0299_36 HRGMv2_0299_36_6 9548 12211 - 1.B.14.6.1
sulfatase HRGMv2_0299_36 HRGMv2_0299_36_7 12291 13361 - S1_14
pfam HRGMv2_0299_36 HRGMv2_0299_36_8 13474 14547 - HGSNAT_cat
CAZyme HRGMv2_0299_36 HRGMv2_0299_36_9 14590 16428 - GH35
CAZyme HRGMv2_0299_36 HRGMv2_0299_36_10 16464 18632 - GH89
NULL(UNKNOWN) HRGMv2_0299_36 HRGMv2_0299_36_11 18666 21062 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0299_36 HRGMv2_0299_36_12 21183 22667 - SusD_RagB | SusD-like_3
TC HRGMv2_0299_36 HRGMv2_0299_36_13 22688 26104 - 1.B.14.6.1
Gene ID: HRGMv2_0299_36_5
Type: TC
Location: 7900 - 9513 (-)
Gene ID: HRGMv2_0299_36_6
Type: TC
Location: 9548 - 12211 (-)
Gene ID: HRGMv2_0299_36_7
Type: sulfatase
Location: 12291 - 13361 (-)
Gene ID: HRGMv2_0299_36_8
Type: pfam
Location: 13474 - 14547 (-)
Gene ID: HRGMv2_0299_36_9
Type: CAZyme
Location: 14590 - 16428 (-)
Gene ID: HRGMv2_0299_36_10
Type: CAZyme
Location: 16464 - 18632 (-)
Gene ID: HRGMv2_0299_36_11
Type:
Location: 18666 - 21062 (-)
Gene ID: HRGMv2_0299_36_12
Type: pfam
Location: 21183 - 22667 (-)
Gene ID: HRGMv2_0299_36_13
Type: TC
Location: 22688 - 26104 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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