PROTEIN: HRGMv2_0299_36_11
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Protein File & Metadata
Source:
HRGMv2_0299_36_11.pdb
Genome ID:
Protein ID:
HRGMv2_0299_36_11
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Protein Sequence
MNNKTIQSIL FAIFAGLATT ATAQTTHLRG NNWDCQISTE GHIERIVFEG KAGNDTIPFF 60 IGRGKPGPSF YVNTGSDDVV AQWHPDGRYT YAADIDGINC ELQYTKWRNL PAIRITMRNR 120 SHTPFQPVKA GLKLGIDTYM EKYPEWNHKF FPTLMRNERS HFYGYMQTPG GSVLGIVSPD 180 AVASWSVDYN LGYQDPPPLW FMGHRIESLN LDLMNALPLP AHNPQNQWML KDGETRTWTV 240 AFVNIASLND YERTMNKLTA MPMLEMPNTA CDANGKVEFA VYGSKPEVSV VGADGKTIRL 300 TQRTSGGRNI YACVLPEPGQ YDVKATVDGR TLTGMLVRPK SWQWAMERAR EGALKYHQKA 360 TSHIESWYGF HSSFIAAKYF KEPKLDAKLS QRFDYLYTLL HDTVSVEPKF HKSRIQNTSG 420 TIGMLVDKYE AYGNLADLRH ASQLADWLVD NNQRKDGAYV NRNTVYTSVI YVAKSILELA 480 LVEKRLGATD KFWEDKAAKH YESAKRAIDQ LVGADGDFET EGELTFEDGM ISCSALQIGM 540 LALMQNDDNV RRKYCNAMLK ILNSHDCLTQ LRVPDARRRG GTMRYWEAQY DVQMLPNMFN 600 SPHGWSGWRA YATYYAYLLT GNERWLRESY NAASAFSCLA DYKTGDLRWA FVVDPYLRVT 660 QACSADTHVT ADSLSFGNPH PQLYKTRQFT IGEQYVPMIS DWQTVNTQDN DVHELFKYIG 720 ESMLTNAFVI EREDGQLYGY NCKVTKHGDR WSVEPNERQM TNLHCNLRHA QKITFRGETK 780 QLEAGYIGWA FGRNEYKF 798
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 21 | 797 | 26 | 878 | 0.6996 |
0.7685 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 30 | 757 | 1 | 629 | 0.7508 |
0.8474 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 25 | 741 | 1 | 663 | 0.7504 |
0.8285 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 21 | 762 | 29 | 716 | 0.7458 |
0.8266 |
| AF-Q5AWT9-F1-model_v4 | PL27 | 3 | 743 | 1 | 724 | 0.7456 |
0.7929 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 24 | 796 | 1 | 619 | 0.7439 |
0.8453 |
| E3QS34 | PL27 | 21 | 791 | 1 | 702 | 0.7421 |
0.7995 |
| AF-A0A0P0M2G6-F1-model_v4 | PL27 | 27 | 728 | 22 | 690 | 0.7402 |
0.8261 |
| A0A416I060 | PL27 | 25 | 758 | 7 | 651 | 0.7398 |
0.8301 |
| AF-A0A413RT83-F1-model_v4 | PL27 | 27 | 742 | 22 | 690 | 0.7397 |
0.8257 |
| AF-C7Q3H3-F1-model_v4 | PL27 | 20 | 756 | 8 | 680 | 0.7397 |
0.8166 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8M7F3 | PL27 | 30 | 757 | 1 | 629 | 0.7508 |
0.8474 |
| A0A2S0KVT5 | PL27 | 25 | 741 | 1 | 663 | 0.7504 |
0.8285 |
| A0A6I5ZZU4 | PL27 | 21 | 762 | 29 | 716 | 0.7458 |
0.8266 |
| Q5AWT9 | PL27 | 3 | 743 | 1 | 724 | 0.7456 |
0.7929 |
| F5Y9B7 | PL27 | 24 | 796 | 1 | 619 | 0.7439 |
0.8453 |
| E3QS34 | PL27 | 21 | 791 | 1 | 702 | 0.7421 |
0.7995 |
| A0A416I060 | PL27 | 25 | 758 | 7 | 651 | 0.7398 |
0.8301 |
| C7Q3H3 | PL27 | 20 | 756 | 8 | 680 | 0.7397 |
0.8166 |
| A0A174T7R5 | PL27 | 27 | 742 | 22 | 690 | 0.7392 |
0.8252 |
| A0A3D9KEZ8 | PL27 | 23 | 726 | 1 | 693 | 0.7389 |
0.7993 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 31 | 726 | 1 | 669 | 0.7377 |
0.8118 |
| 5nok-assembly1.cif.gz_A | 31 | 726 | 5 | 668 | 0.7319 |
0.8105 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.