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Cluster: HRGMv2_0299_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0299_90 HRGMv2_0299_90_10 9962 11488 - 2.A.17.4.7
pfam HRGMv2_0299_90 HRGMv2_0299_90_11 11529 12311 - OMP_b-brl_2
CAZyme HRGMv2_0299_90 HRGMv2_0299_90_12 12341 13705 - CBM50
sulfatase HRGMv2_0299_90 HRGMv2_0299_90_13 13809 14564 + S1_4
pfam HRGMv2_0299_90 HRGMv2_0299_90_14 14717 17551 + UvrA_DNA-bind | UvrA_inter
TC HRGMv2_0299_90 HRGMv2_0299_90_15 17570 18310 + 3.A.1.124.5
CAZyme HRGMv2_0299_90 HRGMv2_0299_90_16 18390 22463 + CBM32 | GH2
Gene ID: HRGMv2_0299_90_10
Type: TC
Location: 9962 - 11488 (-)
Gene ID: HRGMv2_0299_90_11
Type: pfam
Location: 11529 - 12311 (-)
Gene ID: HRGMv2_0299_90_12
Type: CAZyme
Location: 12341 - 13705 (-)
Gene ID: HRGMv2_0299_90_13
Type: sulfatase
Location: 13809 - 14564 (+)
Gene ID: HRGMv2_0299_90_14
Type: pfam
Location: 14717 - 17551 (+)
Gene ID: HRGMv2_0299_90_15
Type: TC
Location: 17570 - 18310 (+)
Gene ID: HRGMv2_0299_90_16
Type: CAZyme
Location: 18390 - 22463 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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