Genome Details
Selected Rep_genome_ID: HRGMv2_0149
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0149 | 3,567,698 | 94.67% | 0.497% | Tanzania | Africa | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| PUL0101_HRGMv2_0149_C2 | CGCFAM_01071 | Yes | 18 | 3 | host glycan |
| HRGMv2_0149_CGC52 | CGCFAM_01209 | Yes | 5 | 3 | |
| PUL0106_HRGMv2_0149_C0 | CGCFAM_01249 | Yes | 20 | 4 | host glycan |
| PUL0112_HRGMv2_0149_C0 | CGCFAM_01249 | Yes | 22 | 4 | host glycan |
| HRGMv2_0149_CGC55 | CGCFAM_01275 | Yes | 17 | 13 | |
| HRGMv2_0149_CGC8 | CGCFAM_01491 | Yes | 15 | 6 | |
| HRGMv2_0149_CGC4 | CGCFAM_01743 | Yes | 15 | 7 | |
| HRGMv2_0149_CGC67 | CGCFAM_01797 | Yes | 5 | 1 | |
| HRGMv2_0149_CGC2 | CGCFAM_02862 | Yes | 11 | 2 | |
| HRGMv2_0149_CGC42 | CGCFAM_02864 | Yes | 12 | 5 | |
| HRGMv2_0149_CGC40 | CGCFAM_02953 | Yes | 15 | 9 | |
| HRGMv2_0149_CGC13 | CGCFAM_04268 | Yes | 9 | 4 | |
| HRGMv2_0149_CGC46 | CGCFAM_05942 | Yes | 10 | 4 | |
| HRGMv2_0149_CGC19 | CGCFAM_05943 | Yes | 17 | 1 | |
| HRGMv2_0149_CGC35 | CGCFAM_05945 | Yes | 4 | 1 | |
| HRGMv2_0149_CGC30 | CGCFAM_09507 | Yes | 6 | 1 | |
| HRGMv2_0149_CGC58 | CGCFAM_09508 | Yes | 6 | 3 |
Top CAZyme Families