Cluster: PUL0106_HRGMv2_0149_C0
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: HRGMv2_0149
- CGC Family ID: CGCFAM_01249
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_22 | 28716 | 31709 | + | GH2 |
| CAZyme | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_23 | 31783 | 34221 | - | GH2 |
| pfam | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_24 | 34362 | 37196 | + | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1_2 |
| TC | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_25 | 37218 | 38162 | + | 2.A.115.1.2 |
| CAZyme | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_26 | 38280 | 40862 | + | GH2 |
| CAZyme | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_27 | 40909 | 43218 | + | CBM32 | GH20 |
| sulfatase | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_28 | 43365 | 43949 | + | S1_7 |
| TF | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_29 | 43992 | 44984 | - | Trans_reg_C |
| pfam | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_30 | 45205 | 45855 | - | CAT |
| STP | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_31 | 45852 | 46763 | - | Pyr_redox |
| pfam | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_32 | 46834 | 47937 | - | MMR_HSR1 | FeoB_N | YchF-GTPase_C |
| pfam | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_33 | 48139 | 48525 | - | DUF3836 |
| sulfatase | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_34 | 48679 | 51447 | - | S1_2 |
| pfam | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_35 | 51542 | 52516 | + | polyprenyl_synt |
| pfam | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_36 | 52719 | 53660 | - | DeoC |
| pfam | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_37 | 53666 | 53986 | - | PRA-PH | MazG |
| pfam | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_38 | 53989 | 54441 | - | Tyr_Deacylase |
| pfam | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_39 | 54474 | 56306 | - | GIY-YIG | UvrC_RNaseH_dom | HHH_5 | UvrC_RNaseH |
| STP | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_40 | 56409 | 56933 | - | Pribosyltran |
| TC | PUL0106_HRGMv2_0149_C0 | HRGMv2_0149_17_41 | 56991 | 58862 | - | 1.C.39.4.5 |
Gene ID: HRGMv2_0149_17_22
Type: CAZyme
Location: 28716 - 31709 (+)
Type: CAZyme
Location: 28716 - 31709 (+)
Gene ID: HRGMv2_0149_17_23
Type: CAZyme
Location: 31783 - 34221 (-)
Type: CAZyme
Location: 31783 - 34221 (-)
Gene ID: HRGMv2_0149_17_24
Type: pfam
Location: 34362 - 37196 (+)
Type: pfam
Location: 34362 - 37196 (+)
Gene ID: HRGMv2_0149_17_25
Type: TC
Location: 37218 - 38162 (+)
Type: TC
Location: 37218 - 38162 (+)
Gene ID: HRGMv2_0149_17_26
Type: CAZyme
Location: 38280 - 40862 (+)
Type: CAZyme
Location: 38280 - 40862 (+)
Gene ID: HRGMv2_0149_17_27
Type: CAZyme
Location: 40909 - 43218 (+)
Type: CAZyme
Location: 40909 - 43218 (+)
Gene ID: HRGMv2_0149_17_28
Type: sulfatase
Location: 43365 - 43949 (+)
Type: sulfatase
Location: 43365 - 43949 (+)
Gene ID: HRGMv2_0149_17_29
Type: TF
Location: 43992 - 44984 (-)
Type: TF
Location: 43992 - 44984 (-)
Gene ID: HRGMv2_0149_17_30
Type: pfam
Location: 45205 - 45855 (-)
Type: pfam
Location: 45205 - 45855 (-)
Gene ID: HRGMv2_0149_17_31
Type: STP
Location: 45852 - 46763 (-)
Type: STP
Location: 45852 - 46763 (-)
Gene ID: HRGMv2_0149_17_32
Type: pfam
Location: 46834 - 47937 (-)
Type: pfam
Location: 46834 - 47937 (-)
Gene ID: HRGMv2_0149_17_33
Type: pfam
Location: 48139 - 48525 (-)
Type: pfam
Location: 48139 - 48525 (-)
Gene ID: HRGMv2_0149_17_34
Type: sulfatase
Location: 48679 - 51447 (-)
Type: sulfatase
Location: 48679 - 51447 (-)
Gene ID: HRGMv2_0149_17_35
Type: pfam
Location: 51542 - 52516 (+)
Type: pfam
Location: 51542 - 52516 (+)
Gene ID: HRGMv2_0149_17_36
Type: pfam
Location: 52719 - 53660 (-)
Type: pfam
Location: 52719 - 53660 (-)
Gene ID: HRGMv2_0149_17_37
Type: pfam
Location: 53666 - 53986 (-)
Type: pfam
Location: 53666 - 53986 (-)
Gene ID: HRGMv2_0149_17_38
Type: pfam
Location: 53989 - 54441 (-)
Type: pfam
Location: 53989 - 54441 (-)
Gene ID: HRGMv2_0149_17_39
Type: pfam
Location: 54474 - 56306 (-)
Type: pfam
Location: 54474 - 56306 (-)
Gene ID: HRGMv2_0149_17_40
Type: STP
Location: 56409 - 56933 (-)
Type: STP
Location: 56409 - 56933 (-)
Gene ID: HRGMv2_0149_17_41
Type: TC
Location: 56991 - 58862 (-)
Type: TC
Location: 56991 - 58862 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Gene Composition
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