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Genome Details

Selected Rep_genome_ID: HRGMv2_0149
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
HRGMv2_0149 3,567,698 94.67% 0.497% Tanzania Africa HRGM
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_0149_CGC57 CGCFAM_00001 Yes 4 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0149_CGC60 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0149_CGC62 CGCFAM_00001 Yes 6 2 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
HRGMv2_0149_CGC38 CGCFAM_00025 Yes 8 2 pectin/alpha-glucan
HRGMv2_0149_CGC64 CGCFAM_00038 Yes 5 3
HRGMv2_0149_CGC50 CGCFAM_00043 Yes 6 3 alpha-glucan
HRGMv2_0149_CGC24 CGCFAM_00095 Yes 6 2
HRGMv2_0149_CGC3 CGCFAM_00129 Yes 6 4 beta-mannan
HRGMv2_0149_CGC39 CGCFAM_00136 Yes 7 4 pectin
HRGMv2_0149_CGC45 CGCFAM_00151 Yes 7 4
HRGMv2_0149_CGC9 CGCFAM_00180 Yes 6 4
HRGMv2_0149_CGC68 CGCFAM_00202 Yes 4 1
HRGMv2_0149_CGC37 CGCFAM_00225 Yes 13 6 arabinogalactan
HRGMv2_0149_CGC48 CGCFAM_00273 Yes 19 15 xylan
HRGMv2_0149_CGC59 CGCFAM_00316 Yes 7 2
HRGMv2_0149_CGC10 CGCFAM_00320 Yes 7 2
HRGMv2_0149_CGC15 CGCFAM_00379 Yes 3 1
HRGMv2_0149_CGC32 CGCFAM_00388 Yes 6 4
HRGMv2_0149_CGC14 CGCFAM_00445 Yes 3 2
HRGMv2_0149_CGC7 CGCFAM_00567 Yes 4 1
HRGMv2_0149_CGC25 CGCFAM_00582 Yes 11 4 arabinogalactan
HRGMv2_0149_CGC61 CGCFAM_00633 Yes 11 2
HRGMv2_0149_CGC33 CGCFAM_00696 Yes 3 1
HRGMv2_0149_CGC43 CGCFAM_00724 Yes 3 1 xylan
HRGMv2_0149_CGC49 CGCFAM_00755 Yes 7 1
Top CAZyme Families