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Cluster: HRGMv2_0149_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0149_15 HRGMv2_0149_15_32 44609 45382 - 3.A.1.27.4
TC HRGMv2_0149_15 HRGMv2_0149_15_33 45379 46122 - 3.A.1.27.2
TC HRGMv2_0149_15 HRGMv2_0149_15_34 46263 47081 + 1.B.42.1.2
pfam HRGMv2_0149_15 HRGMv2_0149_15_35 47172 48335 - SusE | SusF_SusE
TC HRGMv2_0149_15 HRGMv2_0149_15_36 48356 50023 - 8.A.46.1.1
TC HRGMv2_0149_15 HRGMv2_0149_15_37 50045 53029 - 1.B.14.6.1
CAZyme HRGMv2_0149_15 HRGMv2_0149_15_38 53146 55326 - GH97
CAZyme HRGMv2_0149_15 HRGMv2_0149_15_39 55505 57358 - GH13_46
Gene ID: HRGMv2_0149_15_32
Type: TC
Location: 44609 - 45382 (-)
Gene ID: HRGMv2_0149_15_33
Type: TC
Location: 45379 - 46122 (-)
Gene ID: HRGMv2_0149_15_34
Type: TC
Location: 46263 - 47081 (+)
Gene ID: HRGMv2_0149_15_35
Type: pfam
Location: 47172 - 48335 (-)
Gene ID: HRGMv2_0149_15_36
Type: TC
Location: 48356 - 50023 (-)
Gene ID: HRGMv2_0149_15_37
Type: TC
Location: 50045 - 53029 (-)
Gene ID: HRGMv2_0149_15_38
Type: CAZyme
Location: 53146 - 55326 (-)
Gene ID: HRGMv2_0149_15_39
Type: CAZyme
Location: 55505 - 57358 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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