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Cluster: HRGMv2_0149_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0149_4 HRGMv2_0149_4_77 86634 87410 - GT2
pfam HRGMv2_0149_4 HRGMv2_0149_4_78 87469 88260 - Glycos_transf_2
pfam HRGMv2_0149_4 HRGMv2_0149_4_79 88257 89330 - EpsG
CAZyme HRGMv2_0149_4 HRGMv2_0149_4_80 89330 90055 - GT32
CAZyme HRGMv2_0149_4 HRGMv2_0149_4_81 90031 91200 - GT4
CAZyme HRGMv2_0149_4 HRGMv2_0149_4_82 91286 92335 - GT2
pfam HRGMv2_0149_4 HRGMv2_0149_4_83 92346 93464 - FAD_binding_2 | GLF | NAD_binding_8
TC HRGMv2_0149_4 HRGMv2_0149_4_84 93508 94767 - 2.A.66.2.16
TC HRGMv2_0149_4 HRGMv2_0149_4_85 95479 96984 + 2.A.38.1.1
Gene ID: HRGMv2_0149_4_77
Type: CAZyme
Location: 86634 - 87410 (-)
Gene ID: HRGMv2_0149_4_78
Type: pfam
Location: 87469 - 88260 (-)
Gene ID: HRGMv2_0149_4_79
Type: pfam
Location: 88257 - 89330 (-)
Gene ID: HRGMv2_0149_4_80
Type: CAZyme
Location: 89330 - 90055 (-)
Gene ID: HRGMv2_0149_4_81
Type: CAZyme
Location: 90031 - 91200 (-)
Gene ID: HRGMv2_0149_4_82
Type: CAZyme
Location: 91286 - 92335 (-)
Gene ID: HRGMv2_0149_4_83
Type: pfam
Location: 92346 - 93464 (-)
Gene ID: HRGMv2_0149_4_84
Type: TC
Location: 93508 - 94767 (-)
Gene ID: HRGMv2_0149_4_85
Type: TC
Location: 95479 - 96984 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0149_4_85 vegetarian > vegan 1.32432 0.03781

🧭 Explore Read Mapping of CGC

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