Genome Details
Selected Rep_genome_ID: CGMR093085
Total Genomes Found: 4
Total Genomes Found: 4
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| AG340_54 | 3,104,927 | 97.96% | 0% | NA | Africa | H3AfricaPhase2 |
| CGMR093085 | 2,900,725 | 97.96% | 0% | China | Asia | CGMR |
| HRGMv2_3769 | 3,071,523 | 97.95% | 0% | China | Asia | HRGM |
| Rep_723 | 3,066,530 | 97.9592% | 0% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| CGMR093085_CGC12 | CGCFAM_00875 | Yes | 3 | 1 | |
| CGMR093085_CGC29 | CGCFAM_00894 | Yes | 23 | 13 | |
| CGMR093085_CGC32 | CGCFAM_01008 | Yes | 5 | 2 | |
| CGMR093085_CGC14 | CGCFAM_01178 | Yes | 22 | 12 | |
| CGMR093085_CGC24 | CGCFAM_01200 | Yes | 4 | 1 | |
| CGMR093085_CGC19 | CGCFAM_01239 | Yes | 15 | 4 | host glycan |
| CGMR093085_CGC20 | CGCFAM_01384 | Yes | 10 | 3 | |
| CGMR093085_CGC36 | CGCFAM_01411 | Yes | 3 | 1 | |
| CGMR093085_CGC28 | CGCFAM_02036 | Yes | 4 | 1 | |
| CGMR093085_CGC4 | CGCFAM_02093 | Yes | 5 | 1 | |
| CGMR093085_CGC17 | CGCFAM_02094 | Yes | 4 | 1 | |
| CGMR093085_CGC3 | CGCFAM_04767 | Yes | 3 | 1 | |
| CGMR093085_CGC5 | CGCFAM_04769 | Yes | 6 | 1 | |
| CGMR093085_CGC21 | CGCFAM_07258 | Yes | 8 | 1 | |
| CGMR093085_CGC10 | CGCFAM_07550 | Yes | 11 | 2 | |
| CGMR093085_CGC2 | CGCFAM_08978 | Yes | 6 | 1 |
Top CAZyme Families