Cluster: CGMR093085_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR093085
- CGC Family ID: CGCFAM_01008
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_56629 | k141_56629_43 | 46863 | 48470 | + | 3.D.10.1.1 |
| NULL(UNKNOWN) | k141_56629 | k141_56629_44 | 48464 | 49495 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_56629 | k141_56629_45 | 49514 | 50722 | + | GT4 |
| CAZyme | k141_56629 | k141_56629_46 | 50719 | 51912 | + | GT4 |
| TC | k141_56629 | k141_56629_47 | 51916 | 53814 | - | 2.A.16.2.2 |
Gene ID: k141_56629_43
Type: TC
Location: 46863 - 48470 (+)
Type: TC
Location: 46863 - 48470 (+)
Gene ID: k141_56629_44
Type:
Location: 48464 - 49495 (+)
Type:
Location: 48464 - 49495 (+)
Gene ID: k141_56629_45
Type: CAZyme
Location: 49514 - 50722 (+)
Type: CAZyme
Location: 49514 - 50722 (+)
Gene ID: k141_56629_46
Type: CAZyme
Location: 50719 - 51912 (+)
Type: CAZyme
Location: 50719 - 51912 (+)
Gene ID: k141_56629_47
Type: TC
Location: 51916 - 53814 (-)
Type: TC
Location: 51916 - 53814 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.