Cluster: CGMR093085_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR093085
- CGC Family ID: CGCFAM_04769
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_63862 | k141_63862_120 | 158994 | 159740 | + | 3.A.1.125.2 |
| pfam | k141_63862 | k141_63862_121 | 159737 | 162562 | + | FtsX | FtsX | MacB_PCD |
| CAZyme | k141_63862 | k141_63862_122 | 162729 | 165173 | + | GH33 |
| pfam | k141_63862 | k141_63862_123 | 165515 | 166144 | + | CAT |
| pfam | k141_63862 | k141_63862_124 | 166329 | 169382 | + | HD-CE |
| TC | k141_63862 | k141_63862_125 | 169406 | 170374 | - | 3.A.1.5.35 |
Gene ID: k141_63862_120
Type: TC
Location: 158994 - 159740 (+)
Type: TC
Location: 158994 - 159740 (+)
Gene ID: k141_63862_121
Type: pfam
Location: 159737 - 162562 (+)
Type: pfam
Location: 159737 - 162562 (+)
Gene ID: k141_63862_122
Type: CAZyme
Location: 162729 - 165173 (+)
Type: CAZyme
Location: 162729 - 165173 (+)
Gene ID: k141_63862_123
Type: pfam
Location: 165515 - 166144 (+)
Type: pfam
Location: 165515 - 166144 (+)
Gene ID: k141_63862_124
Type: pfam
Location: 166329 - 169382 (+)
Type: pfam
Location: 166329 - 169382 (+)
Gene ID: k141_63862_125
Type: TC
Location: 169406 - 170374 (-)
Type: TC
Location: 169406 - 170374 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia muciniphila_E
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.