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Cluster: CGMR093085_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_90718 k141_90718_90 102217 103605 + 3.A.1.5.32
TC k141_90718 k141_90718_91 103611 105218 + 3.A.1.5.21
STP k141_90718 k141_90718_92 105247 107496 + SBP_bac_5
TC k141_90718 k141_90718_93 107500 108477 + 3.A.1.5.12
TC k141_90718 k141_90718_94 108498 109505 + 3.A.1.5.20
pfam k141_90718 k141_90718_95 109610 110713 - Ala_racemase_C | Ala_racemase_N
pfam k141_90718 k141_90718_96 111156 112088 + DUF5655
TC k141_90718 k141_90718_97 112196 113065 + 2.A.7.3.61
CAZyme k141_90718 k141_90718_98 113185 115434 + AA1
STP k141_90718 k141_90718_99 115493 116824 + HD
CAZyme k141_90718 k141_90718_100 116841 119180 - GH141
Gene ID: k141_90718_90
Type: TC
Location: 102217 - 103605 (+)
Gene ID: k141_90718_91
Type: TC
Location: 103611 - 105218 (+)
Gene ID: k141_90718_92
Type: STP
Location: 105247 - 107496 (+)
Gene ID: k141_90718_93
Type: TC
Location: 107500 - 108477 (+)
Gene ID: k141_90718_94
Type: TC
Location: 108498 - 109505 (+)
Gene ID: k141_90718_95
Type: pfam
Location: 109610 - 110713 (-)
Gene ID: k141_90718_96
Type: pfam
Location: 111156 - 112088 (+)
Gene ID: k141_90718_97
Type: TC
Location: 112196 - 113065 (+)
Gene ID: k141_90718_98
Type: CAZyme
Location: 113185 - 115434 (+)
Gene ID: k141_90718_99
Type: STP
Location: 115493 - 116824 (+)
Gene ID: k141_90718_100
Type: CAZyme
Location: 116841 - 119180 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_90718_96 vegan > omnivore 16.12331 0.01332
k141_90718_96 vegetarian > omnivore 14.40525 0.03393
k141_90718_98 vegetarian > omnivore 1.00031 0.03393

🧭 Explore Read Mapping of CGC

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